Bioinformatics and Structural Biology - Tools & Services   French version النسخة الفرنسية Arabic version النسخة العربية

Dates: 2020 - 2019 - 2018 - 2017 - 2015 - 2014 - 2013 - 2012 - 2011 - 2009 - 2006 - 2005 - 2004 - 2003 - 2000 - 1999 - 1998 - 1997

See also:

  • 2020 - Abdelkrim Rachedi Mutations in the SARS-CoV-2 complete genome sequences from strains isolated in Blida province, Algeria. JNBGP 2020: Journees Nationales virtuelles de bioinformatique: Genomique et proteomique - USDB, October 09-10, 2020

    The contribution included the Viruses data Integration Database

  • 2019 - Abdellahi Ould Ahmed Salem & Abdelkrim Rachedi* Structural Targets Annotation Database - STAD & PR-Proteins selected targets. The International Conference on Biotechnology and Cancer, December 07-08, 2019

  • 2019 - Soumeya KHERIS, Mokhtar BENREGUIEG and Abdelkrim RACHEDI* Bacterial Antibiotic Resistance Investigation Database - BARID. International Bioinformatics Day, JIBioinfo2019, 05 Nov. 2019

  • 2018 - Abdellahi Ould Ahmed Salem, Mira Raimes, Aicha Bessaih, Mohamed Brahimi, Mohamed Amine Deghem, Mehdi Zein and Abdelkrim Rachedi* Structural & Functional Motifs in Metabolic Enzymes . A new set of Functional Motifs. 2eme Colloques International, Biosciences 2108 "Genie Enzymatique et Production de Metabolites", 28-29 October2018, Oran, Algeria
    -> See: - Abstract
    ->         - Conference Book: |.1.| or |.2.|

  • 2018 - A. Rachedi, A. Mohammedi and A. Boukhalfa A Phytoecological Database for Annotating Flora in Region of Maamora - Saida, Algeria. Proceedings: International Seminar On Medicinal Plants (SIPM . January 2018), page 23., 2018, Al-Oued, Algeria
    ->See: Abstract

  • 2017 - SALEM Abdellahi, RACHEDI Abdelkrim* Structural/Functional Motifs in the Enzymes of the Krebs Cycle, 1ER SEMINAIRE DE BIOINFORMATIQUE, April 04-06, 2017, Blida, Algeria.
    ->Explore: Citric Acid Cycle Binding Structural & Functional Motifs

  • 2015 - Abdelkrim Rachedi. STAD the Structural Targets Annotation Database, Proceedings of the 08th International Biocuration Conference, From Big Data to Big Discovery April 23-26, 2015, Beijing, China.
    ->Find in Biocuration 2015 book

  • 2014 - A Boukhalfa, A Mohammedi and A Rachedi An online Phytoecological Database and Exploration System for Flora in the region of Maamora, Saida., La Dynamique et la Valorisation des Ecocystemes Arides et Semi-arides dans un evironnement Changeant (DVEEC), Proceedings, page 59., 2014

  • 2013 - Abdelkrim Rachedi. STAD: Structural Targets Annotation Database, Proceedings of the 11th International Conference on Biology and Synchrotron Radiation, 8 - 11 September 2013, Humburg, Germany. ( A conference Report has been published in the Journal Synchrotron Radiation, Volume 21, Part 1, Pages 280-282 January 2014,
    ->Find in Journal Synchrotron Radiation)

  • 2013 - Abdelkrim Rachedi, Khuphukile Madida. NALD: Nucleic Acids and Ligands Database, Modeling Approaches and Algorithms for Advanced Computer Applications (Springer) 2013, 488: 329-336
    ->Find in SpringerLink

  • 2013 - Abdelkrim Rachedi. Vers une Base-de-donnees et System d'Exploitation en ligne de la Flore en Algerie (http://www.bioinformaticstools.org/fina). La Journee Scientifique Sur l'Eau et l'Environnement, 30 Juin 2013, Universite Dr. Tahar Moulay,Saida, Algerie.

  • 2012 - Abdelkrim Rachedi and Wits University (Johannesburg) SYSTEMS AND METHODS FOR USE IN MOLECULAR DRUG DESIGN, Patent publication (WO2012/12043), 13 Sept. 2012.
    ->Find in WIPO

  • 2012 - Abdelkrim Rachedi Bioinformatics in Diseases (like cancer, HIV, Malaria ... etc). International Seminar ' Cancer, Cellular Stress and Bioactive Substances' CSCSB, 23-24 September 2012 - Jijel, Algeria

  • 2011 - Abdelkrim Rachedi, Khuphukile Madida. NALD: Nucleic Acids and Ligands Database; Ligand Binding Motifs, Binding Classes & Disease Links, 2nd ISCB Africa ASBCB Conference on Bioinformatics, March 9-11, 2011 - CapeTown, South Africa.

  • 2011 - Abdelkrim Rachedi. Annotation of structural targets in SouthAfrica; the STAD database, 2nd ISCB Africa ASBCB Conference on Bioinformatics, March 9-11, 2011 - CapeTown, South Africa.

  • 2009 - Abdelkrim Rachedi. STAD: Structural Targets Annotation Database, Proceedings for the Second Southern African Bioinformatics Workshop, 11th - 12th, Johannesburg, October 2009 - Johannesburg, South Africa.

  • 2006 - Albeck S, .., Rachedi A et.al. SPINE bioinformatics and data-management aspects of high-throughput structural biology. Acta Crystallogr D Biol Crystallogr. 2006 Oct.
    ->Find in PubMed

  • 2005 - (in relation to the SSFS system )
    Golovin A., Dimitropoulos D., Oldfield T., Rachedi A. and Henrick (2005) MSDsite: A Database Search and Retrieval System for the Analysis and Viewing of Bound Ligands and Active Sites. PROTEINS: Structure, Function, and Bioinformatics 58(1): 190-9.
    ->Find in PubMed

  • 2004 - A. Golovin, .., A. Rachedi et. al. E-MSD: an integrated data resource for bioinformatics, Nucleic Acids Research, 32 (Database issue), D211-D216, 2004.

  • 2003 - Boutselakis, .., Rachedi, A. et. al. E-MSD: The European Bioinformatics Institute Macromolecular Structure Database. Nucleic Acids Research, 31, 458-462, 2003.

  • 2000 - Abdelkrim Rachedi, Michael Rebhan and Hong Xue. GABAagent: a system for integrating data on GABA receptors. Bioinformatics. 2000 Apr;16(4):301-12.
    ->Find in PubMed

  • 1999 - Abdelkrim Rachedi, Michael Rebhan and Hong Xue. Internet-based Integrated Retrieval Information System for GABA receptors. Society for Neuroscience Abstracts. Vol.25, Part 2, page 1809, Oct. 1999 - Miami Beach, Florida, United States.

  • 1999 - Khoo ASB, Balraj P, Rachedi A, Chin CN, Volpi L. A novel complex mutation of the OTC (Ornithine Transcarbamylase) Gene in a Malaysian Pedigree. Human Mutation. 1999 Nov; 14(5): 448.

  • 1998 - Khoo ASB, Balraj P, Rachedi A, Volpi L., Chin CN. Clinical Correlation of a Novel Mutant Ornithine Transcarbamylase (OTCase) Homology Model. In Proceedings of the 10th National Biotechnology Seminar: Biotechnology towards the next millenium, pages 26-27. SIRIM Berhad, Malaysia, 27 & 28 October 1998.
    See link to the Proceedings: https://library.mosti.gov.my/cgi-bin/koha/opac-MARCdetail.pl?biblionumber=19413
    See also: Clinical Correlation of a Novel Mutant Ornithine Transcarbamylase (OTCase) Homology Model

  • 1998 - Khoo ASB, Balraj P, Rachedi A, Volpi L., Tan SK, Lim PKC, Chin CN. Molecular Genetic Investigations of a family with multiple early neonatal deaths. In Abstracts of the First Scientific Seminar of the National Institutes of Health, Ministry of Health, Malaysia: Research in the New Millenium, Page 45. Kuala Lumpur, Malaysia, 30-31 October 1998.

  • 1997 - A. Rachedi, C.E. Sansom, C.R. Groom, J. Thillet, R. Griffin & A.J. Geddes. The Structure of Mouse Dihydrofolate Reductase in Ternary Complex with NADPH and the Lipophilic Antifolate, Methylbenzoprim. In Proceedings of the 9th National Biotechnology Seminar: Positioning National R & D in Biotechnology for Global Competitiveness, pages 96-102. Penang, Malaysia, 23-26 November 1997.
    See link to the Proceedings: https://library.mosti.gov.my/cgi-bin/koha/opac-MARCdetail.pl?biblionumber=19469

  • Dates: 2020 - 2019 - 2018 - 2017 - 2015 - 2014 - 2013 - 2012 - 2011 - 2009 - 2006 - 2005 - 2004 - 2003 - 2000 - 1999 - 1998 - 1997

    Timeline ...      
  • April 2017: CACFMS Structural/Functional Motifs In The Enzymes Of The Krebs Cycle, by the SBB group at UTM Univ., Saida, Algeria.   More...
  • September 2015: CUPID A new online under-developement system comes as a result of international collaboration project with Dept. of Cell and Molecular Biology, Uppsala University,Uppsala,Sweden.   More...
  • November 2014: FIMA A new online Phytoecological Database & Exploration System for Flora in the region of Maamora, Saida, created by the SBB group at UTM Univ., Saida, Algeria.   More...
  • September 2014: STAD updates; 2 new Targets by the SBB group at UTM Univ., Saida, Algeria.   More...
  • January 2014: DIRC a newly created bioinformatics service tool for creating database systems providing integrated data for a set of biology-related keywords.   More...
  • December 2013: STAD updates; 9 new 3D structures by UCT Univ., South Africa and 3 updated targets by UAE Univ., Morocco.   More...
  • November 2013: Neuro. updates; a new card module (5th), News card (RSS feed), has been added to the Neuro system”.    More...
  • September 2013: STAD updates; new structural targets    More...
  • August 2013: Neuro. system now provides a 4th card of search results called Videos card”.    More...
  • August 2013: STAD updates; 4 new 3D structures of the Amidase enzyme by the Strcutural Biology Group, UCT Univ., Capetown, South Africa.    More...
  • June 2013: Neuro. system now provides 3 cards of search results. These include “Integrated Data”, “Disease” and “Sites & Images” cards.    More...
  • May 2013: NALD Database & Methods published in Springer.    More...
  • April 2013: "Neuro." updates; a new bioinformatics resource    More...
  • February 2013: STAD updates; new structural targets    More...
  • September 2012: Patent publication (WO2012/12043) "SYSTEMS AND METHODS FOR USE IN MOLECULAR DRUG DESIGN"    More...
  • February 2011: STAD the first and only African contributor to the PSI TargetTrack    More...
  • Bioinformatics news ...  
  • SynGAP Research Fund awards $1...
  • AlphaFold Analyzes Millions of...
  • Structural bioinformatics anal...
  • Everything You Need To Know Ab...
  • AlphaFault: High schoolers giv...
  • EPA Releases SeqAPASS Version ...
  • Deeper inside the specificity ...
  • Fighting COVID-19 with Knowled...
  • Bioinformatics and COVID-19 th...
  • Structural Bioinformatics Comp...
  • PDB50: A special symposium cel...
  • Observation selection bias in ...
  • Douglas Theobald | Faculty & R...
  • Discovery of small molecule bi...
  • Probing Medin Monomer Structur...
  • Designing multi-epitope vaccin...
  • A paradigm shift in structural...
  • Search for efficient inhibitor...
  • wwPDB biocuration: on the fron...
  • Study Identifies New Levers fo...
  • Advancing structural biology t...
  • Design and structural bioinfor...
  • Transforming Biology Through A...
  • Advanced database mining of ef...
  • Binding and conformational pro...
  • Art as a tool for science - Na...
  • The opportunities and challeng...
  • Undergraduate structural biolo...
  • Predicted structural mimicry o...
  • Discovery of small molecule bi...
  • Anna Tramontano 1957–2017 - ...
  • Joe Greener appointed Group Le...
  • Berman recognized for her work...
  • Cyrus Chothia (1942 – 2019) ...
  • Andrew McLachlan (1935 – 202...
  • A young researcher strives to ...
  • Cyrus Chothia, bioinformatics ...
  • Bio3D: New bioinformatics tool...
  • Flexible paths towards working...
  • IIT-BHU holds five-day course ...
  • Bio3D-web: New online tools fo...
  • Latest Bioinformatics Project ...
  • Revenue generation: We've rece...
  • University of Madras Post Doct...
  • Certificate Program in Bioinfo...
  • 3-day hands on training worksh...
  • BIT's other services
  • The AlgeriansGate* server

  • The Algerian Scientists Database

  • Advert Panels Creation

  • BIT on Facebook
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top
    Go Top

    رغم الإنخفاض النسبي لأعداد الإصابة، لا يزال فيروس الإيبولا والمرض المرافق له يشكل خطرا على الصحة في إفريقيا والعلم أجمع...

    Posted by BioinformaticsTools on Wednesday, 10 June 2015
    Go Top

    "فيما" أو FIMA هي قاعدة بيانات جديدة بقسم البيولوجيا، جامعة سعيدة، تشمل الغطاء النباتي البيئي Phytoecological وهي كذلك ن...

    Posted by BioinformaticsTools on Sunday, 29 March 2015
    Go Top

    A new Phytoecological Database and Exploration system for “ Flora “ in the region of Maamora, Saida, Algeria. It is...

    Posted by BioinformaticsTools on Sunday, 29 March 2015
    Go Top

    Student & Collaborative Research Projects ..

      Student and Collaborative Research Projects in Bioinformatics & Structural Biology


    Ongoing Research Projects

    IPPI: Interchain Protein-Protein Interactions

    Neuro: Integrating data on the Nervous System

    PSAcan: Prostate Cancer and PSA in Saida, Algeria

    Educational Services Education made easy for both lecturers and students. Educational Online Tools & Downloads Educational online and PC standalone tools.
    Tools, Databases & Services

    COVID-19 & Viruses Data Integration

    SARS-CoV-2 Variants, Genomes & Mutations Explorer

    Viruses Integration Database (Incl. SARS-CoV-2) Vr-β [6], [8]

    Bioinformatics Mobile Apps.

    FIMA Android vr 1.0 [4.1], [4.2]

    GABAagent Android vr 1.0 [6]

    Microbial Bioinformatics Research & Services

    BARID: Bacterial Antibiotic Resistance Investigation Database [7]

    Structural Bioinformatics Research & Services

    SSFS: Sequence, Structure and Function Server [1]

    STAD: Structural Targets Annotation Database [2.1], [2.2], [2.3],
    [2.4], [2.5], [2.6]
    - See also:


    NALD: Nucleic Acids and Ligands Database [3]

    Flora Annotation

    FIMA: Flora in Maamora, Saida, Algeria [4.1], [4.2]

    FINA: Flora in Algeria, Database [5]

    Data Intergation tools and databases

    DIRC: A system for creating data integrated databases and search tools for biology-related topics


    CUPID:Chaperone/Usher Pathway Identification Database

    GABAagent: A system for integrating data on GABA receptors [6]

    EblRsr: A resource system for integrating data on the Ebola Virus Disease and related topics.


    Genomics

    N2PR: Nucleic Acid Codes Translation to Proteins and Reverse

    References
         1 2005: Golovin A., Dimitropoulos D., Oldfield T., Rachedi A. and Henrick "MSDsite: A Database Search and Retrieval System for the Analysis and Viewing of Bound Ligands and Active Sites. PROTEINS: Structure, Function, and Bioinformatics 58(1): 190-9 2005" << Find in PubMed

         8 2020: Abdelkrim Rachedi Mutations in the SARS-CoV-2 complete genome sequences from strains isolated in Blida province, Algeria. JNBGP 2020: Journees Nationales virtuelles de bioinformatique: Genomique et proteomique - USDB, October 09-10, 2020

         7 2019: Soumeya KHERIS, Mokhtar BENREGUIEG and Abdelkrim RACHEDI* Bacterial Antibiotic Resistance Investigation Database - BARID. International Bioinformatics Day, JIBioinfo2019, 05 Nov. 2019

      2.1 2019: Abdellahi Ould Ahmed Salem & Abdelkrim Rachedi*Structural Targets Annotation Database - STAD & PR-Proteins selected targets, The International Conference on Biotechnology and Cancer, December 07-08, 2019 - Oran, Algeria.->Find in Conference Book
      2.2 2015: Abdelkrim Rachedi. STAD the Structural Targets Annotation Database, Proceedings of the 08th International Biocuration Conference, From Big Data to Big Discovery, April 23-26,2015 - Beijing, China.
      2.3 2013: Abdelkrim Rachedi. STAD: Structural Targets Annotation Database, Proceedings of the 11th International Conference on Biology and Synchrotron Radiation, 8 - 11 September 2013, Humburg, Germany.
      (A conference Report has been published in the Journal Synchrotron Radiation, Volume 21, Part 1, Pages 280-282 January 2014 ->Find in Journal Synchrotron Radiation)
      2.4 2011: Abdelkrim Rachedi. Annotation of structural targets in South Africa; the STAD database, 2nd ISCB Africa ASBCB Conference on Bioinformatics, March 9-11, 2011 - CapeTown, South Africa.
      2.5 2009: Abdelkrim Rachedi. STAD: Structural Targets Annotation Database, Proceedings for the Second Southern African Bioinformatics Workshop, 11th - 12th, Johannesburg, October 2009 - Johannesburg, South Africa.
      2.6 2006: Albeck S, ..,Rachedi A. .., Henrick K. "SPINE bioinformatics and data-management aspects of high-throughput structural biology. Acta Crystallogr D Biol Crystallogr. 2006
      ->Find in PubMed

         3 2013: Abdelkrim Rachedi, Khuphukile Madida. NALD: Nucleic Acids and Ligands Database, Modeling Approaches and Algorithms for Advanced Computer Applications (Springer) 2013, 488: 329-336
      ->Find in SpringerLink

      4.1 2018: A. Rachedi, A. Mohammedi and A. Boukhalfa, A Mohammedi A Phytoecological Database for Annotating Flora in Region of Maamora - Saida, Algeria. Proceedings: International Seminar On Medicinal Plants (SIPM . 2018), page 23., 2018
      4.2 2014: A Boukhalfa, A Mohammedi and A Rachedi. An online Phytoecological Database and Exploration System for Flora in the region of Maamora, Saida, La Dynamique et la Valorisation des Ecocystemes Arides et Semi-arides dans un evironnement Changeant (DVEEC), Proceedings, page 59., 2014

         5 2013: Abdelkrim Rachedi. Vers une Base-de-donnees et System d'Exploitation en ligne de la Flore en Algerie (http://www.bioinformaticstools.org/fina). La Journee Scientifique Sur l'Eau et l'Environnement, 30 Juin 2013, Universite Dr. Tahar Moulay,Saida, Algerie.

         6 2000: Abdelkrim Rachedi, Michael Rebhan and Hong Xue. GABAagent: a system for integrating data on GABA receptors. Bioinformatics. 2000 Apr;16(4):301-12.
      ->Find in PubMed
    Contact: Dr. Abdelkrim Rachedi at rachedi@bioinformaticstools.org - © 2011-2021