There are 11 SFM Motifs: |
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Nbr of Motifs per PDB entry | PDB Entry | Title | Determination Method | Resolution | R-Factor |
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2 | 1AJ8 | Citrate synthase | X-RAY | 1.90 | 0.191
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| Motif No./Chain | Mode | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / A |
> Structure: LLLHLHLH
+3w
> Sequence: HNHGHRVDFR
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CIT /(1000) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | No SSE | 188 | HIS | CB | O5 | A | 1000 | 3.2 | van der Waals | A | No SSE | 188 | HIS | CG | O1 | A | 1000 | 3.89 | van der Waals | A | No SSE | 188 | HIS | CG | O5 | A | 1000 | 3.29 | van der Waals | A | No SSE | 188 | HIS | CD2 | C1 | A | 1000 | 3.91 | van der Waals | A | No SSE | 188 | HIS | CD2 | O1 | A | 1000 | 2.81 | van der Waals | A | No SSE | 188 | HIS | CD2 | O7 | A | 1000 | 3.38 | van der Waals | A | No SSE | 188 | HIS | CD2 | C6 | A | 1000 | 3.77 | van der Waals | A | No SSE | 188 | HIS | CD2 | O5 | A | 1000 | 3.24 | van der Waals | A | No SSE | 188 | HIS | NE2 | O1 | A | 1000 | 3.65 | H.Bond | A | No SSE | 188 | HIS | NE2 | O7 | A | 1000 | 3.93 | H.Bond | A | No SSE | 191 | ASN | CB | C1 | A | 1000 | 3.38 | van der Waals | A | No SSE | 191 | ASN | CB | O1 | A | 1000 | 3.58 | van der Waals | A | No SSE | 191 | ASN | CB | O2 | A | 1000 | 3.81 | van der Waals | A | No SSE | 191 | ASN | CB | C2 | A | 1000 | 3.45 | van der Waals | A | No SSE | 191 | ASN | CB | O6 | A | 1000 | 3.19 | van der Waals | A | No SSE | 191 | ASN | CG | O6 | A | 1000 | 3.14 | van der Waals | A | No SSE | 191 | ASN | OD1 | O6 | A | 1000 | 3.53 | H.Bond | A | No SSE | 191 | ASN | ND2 | O6 | A | 1000 | 3.49 | H.Bond | A | No SSE | 223 | HIS | CA | O3 | A | 1000 | 3.3 | van der Waals | A | No SSE | 223 | HIS | C | O3 | A | 1000 | 3.11 | van der Waals | A | No SSE | 223 | HIS | O | O3 | A | 1000 | 3.28 | H.Bond | A | No SSE | 223 | HIS | CG | O3 | A | 1000 | 3.89 | van der Waals | A | No SSE | 223 | HIS | CD2 | C2 | A | 1000 | 3.73 | van der Waals | A | No SSE | 223 | HIS | CD2 | C4 | A | 1000 | 3.61 | van der Waals | A | No SSE | 223 | HIS | CD2 | C5 | A | 1000 | 3.66 | van der Waals | A | No SSE | 223 | HIS | CD2 | O3 | A | 1000 | 2.98 | van der Waals | A | No SSE | 223 | HIS | NE2 | C2 | A | 1000 | 3.52 | H.Bond | A | No SSE | 223 | HIS | NE2 | C4 | A | 1000 | 3.81 | H.Bond | A | No SSE | 223 | HIS | NE2 | O3 | A | 1000 | 3.98 | H.Bond | A | No SSE | 223 | HIS | NE2 | O6 | A | 1000 | 3.29 | H.Bond | A | 224-237 H: 5 | 224 | GLY | N | O3 | A | 1000 | 3.59 | H.Bond | A | No SSE | 262 | HIS | CD2 | O7 | A | 1000 | 3.58 | van der Waals | A | No SSE | 262 | HIS | CE1 | C1 | A | 1000 | 3.61 | van der Waals | A | No SSE | 262 | HIS | CE1 | O1 | A | 1000 | 3.22 | van der Waals | A | No SSE | 262 | HIS | CE1 | O2 | A | 1000 | 3.66 | van der Waals | A | No SSE | 262 | HIS | NE2 | C1 | A | 1000 | 3.19 | H.Bond | A | No SSE | 262 | HIS | NE2 | O1 | A | 1000 | 2.96 | H.Bond | A | No SSE | 262 | HIS | NE2 | O2 | A | 1000 | 3.54 | H.Bond | A | No SSE | 262 | HIS | NE2 | C2 | A | 1000 | 3.92 | H.Bond | A | No SSE | 262 | HIS | NE2 | C3 | A | 1000 | 3.72 | H.Bond | A | No SSE | 262 | HIS | NE2 | O7 | A | 1000 | 2.98 | H.Bond | A | 270-282 H: 1 | 271 | ARG | CZ | O7 | A | 1000 | 3.65 | van der Waals | A | 270-282 H: 1 | 271 | ARG | CZ | O5 | A | 1000 | 3.59 | van der Waals | A | 270-282 H: 1 | 271 | ARG | NH1 | O7 | A | 1000 | 3.62 | H.Bond | A | 270-282 H: 1 | 271 | ARG | NH1 | C6 | A | 1000 | 3.95 | H.Bond | A | 270-282 H: 1 | 271 | ARG | NH1 | O5 | A | 1000 | 2.75 | H.Bond | A | 270-282 H: 1 | 271 | ARG | NH2 | O7 | A | 1000 | 2.8 | H.Bond | A | 270-282 H: 1 | 271 | ARG | NH2 | O5 | A | 1000 | 3.57 | H.Bond | A | No SSE | 311 | VAL | CG1 | O4 | A | 1000 | 3.8 | van der Waals | A | No SSE | 312 | ASP | OD2 | C5 | A | 1000 | 3.46 | van der Waals | A | No SSE | 312 | ASP | OD2 | O3 | A | 1000 | 3.41 | H.Bond | A | No SSE | 312 | ASP | OD2 | O4 | A | 1000 | 3.38 | H.Bond | A | 326-351 H: 5 | 333 | PHE | CE2 | C4 | A | 1000 | 3.95 | van der Waals | A | 326-351 H: 5 | 333 | PHE | CZ | C4 | A | 1000 | 3.79 | van der Waals | A | 326-351 H: 5 | 337 | ARG | CZ | O5 | A | 1000 | 3.77 | van der Waals | A | 326-351 H: 5 | 337 | ARG | CZ | O6 | A | 1000 | 3.62 | van der Waals | A | 326-351 H: 5 | 337 | ARG | NH1 | C6 | A | 1000 | 3.71 | H.Bond | A | 326-351 H: 5 | 337 | ARG | NH1 | O5 | A | 1000 | 3.72 | H.Bond | A | 326-351 H: 5 | 337 | ARG | NH1 | O6 | A | 1000 | 2.8 | H.Bond | A | 326-351 H: 5 | 337 | ARG | NH2 | C6 | A | 1000 | 3.68 | H.Bond | A | 326-351 H: 5 | 337 | ARG | NH2 | O5 | A | 1000 | 2.93 | H.Bond | A | 326-351 H: 5 | 337 | ARG | NH2 | O6 | A | 1000 | 3.55 | H.Bond | A | Water | 3025 | HOH | O | O2 | A | 1000 | 2.97 | H.Bond | A | Water | 3035 | HOH | O | O2 | A | 1000 | 2.6 | H.Bond | A | Water | 3194 | HOH | O | O4 | A | 1000 | 2.57 | H.Bond | |
| 2 / B |
> Structure: LLLHLHLH
+3w
> Sequence: HNHGHRVDFR
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CIT /(2000) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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B | No SSE | 188 | HIS | CB | C6 | B | 2000 | 3.99 | van der Waals | B | No SSE | 188 | HIS | CB | O5 | B | 2000 | 3.23 | van der Waals | B | No SSE | 188 | HIS | CG | O1 | B | 2000 | 3.83 | van der Waals | B | No SSE | 188 | HIS | CG | O5 | B | 2000 | 3.4 | van der Waals | B | No SSE | 188 | HIS | CD2 | C1 | B | 2000 | 3.92 | van der Waals | B | No SSE | 188 | HIS | CD2 | O1 | B | 2000 | 2.79 | van der Waals | B | No SSE | 188 | HIS | CD2 | O7 | B | 2000 | 3.43 | van der Waals | B | No SSE | 188 | HIS | CD2 | C6 | B | 2000 | 3.9 | van der Waals | B | No SSE | 188 | HIS | CD2 | O5 | B | 2000 | 3.44 | van der Waals | B | No SSE | 188 | HIS | NE2 | O1 | B | 2000 | 3.67 | H.Bond | B | No SSE | 188 | HIS | NE2 | O7 | B | 2000 | 3.97 | H.Bond | B | No SSE | 191 | ASN | CB | C1 | B | 2000 | 3.44 | van der Waals | B | No SSE | 191 | ASN | CB | O1 | B | 2000 | 3.64 | van der Waals | B | No SSE | 191 | ASN | CB | O2 | B | 2000 | 3.82 | van der Waals | B | No SSE | 191 | ASN | CB | C2 | B | 2000 | 3.57 | van der Waals | B | No SSE | 191 | ASN | CB | O6 | B | 2000 | 3.21 | van der Waals | B | No SSE | 191 | ASN | CG | O6 | B | 2000 | 3.14 | van der Waals | B | No SSE | 191 | ASN | OD1 | O6 | B | 2000 | 3.51 | H.Bond | B | No SSE | 191 | ASN | ND2 | O6 | B | 2000 | 3.51 | H.Bond | B | No SSE | 223 | HIS | CA | O3 | B | 2000 | 3.26 | van der Waals | B | No SSE | 223 | HIS | C | O3 | B | 2000 | 3.01 | van der Waals | B | No SSE | 223 | HIS | O | O3 | B | 2000 | 3.14 | H.Bond | B | No SSE | 223 | HIS | CG | O3 | B | 2000 | 3.9 | van der Waals | B | No SSE | 223 | HIS | CD2 | C2 | B | 2000 | 3.79 | van der Waals | B | No SSE | 223 | HIS | CD2 | C4 | B | 2000 | 3.7 | van der Waals | B | No SSE | 223 | HIS | CD2 | C5 | B | 2000 | 3.74 | van der Waals | B | No SSE | 223 | HIS | CD2 | O3 | B | 2000 | 3.05 | van der Waals | B | No SSE | 223 | HIS | NE2 | C2 | B | 2000 | 3.68 | H.Bond | B | No SSE | 223 | HIS | NE2 | C4 | B | 2000 | 3.95 | H.Bond | B | No SSE | 223 | HIS | NE2 | O6 | B | 2000 | 3.36 | H.Bond | B | 224-237 H: 5 | 224 | GLY | N | O3 | B | 2000 | 3.52 | H.Bond | B | No SSE | 262 | HIS | CD2 | O7 | B | 2000 | 3.51 | van der Waals | B | No SSE | 262 | HIS | CE1 | C1 | B | 2000 | 3.58 | van der Waals | B | No SSE | 262 | HIS | CE1 | O1 | B | 2000 | 3.17 | van der Waals | B | No SSE | 262 | HIS | CE1 | O2 | B | 2000 | 3.69 | van der Waals | B | No SSE | 262 | HIS | CE1 | O7 | B | 2000 | 3.99 | van der Waals | B | No SSE | 262 | HIS | NE2 | C1 | B | 2000 | 3.29 | H.Bond | B | No SSE | 262 | HIS | NE2 | O1 | B | 2000 | 3.03 | H.Bond | B | No SSE | 262 | HIS | NE2 | O2 | B | 2000 | 3.73 | H.Bond | B | No SSE | 262 | HIS | NE2 | C2 | B | 2000 | 3.96 | H.Bond | B | No SSE | 262 | HIS | NE2 | C3 | B | 2000 | 3.69 | H.Bond | B | No SSE | 262 | HIS | NE2 | O7 | B | 2000 | 2.85 | H.Bond | B | 270-282 H: 1 | 271 | ARG | CZ | O7 | B | 2000 | 3.71 | van der Waals | B | 270-282 H: 1 | 271 | ARG | CZ | O5 | B | 2000 | 3.67 | van der Waals | B | 270-282 H: 1 | 271 | ARG | NH1 | O7 | B | 2000 | 3.75 | H.Bond | B | 270-282 H: 1 | 271 | ARG | NH1 | O5 | B | 2000 | 2.87 | H.Bond | B | 270-282 H: 1 | 271 | ARG | NH2 | O7 | B | 2000 | 2.79 | H.Bond | B | 270-282 H: 1 | 271 | ARG | NH2 | O5 | B | 2000 | 3.57 | H.Bond | B | No SSE | 311 | VAL | CG1 | O4 | B | 2000 | 3.99 | van der Waals | B | No SSE | 312 | ASP | OD2 | C5 | B | 2000 | 3.45 | van der Waals | B | No SSE | 312 | ASP | OD2 | O3 | B | 2000 | 3.42 | H.Bond | B | No SSE | 312 | ASP | OD2 | O4 | B | 2000 | 3.29 | H.Bond | B | 326-351 H: 5 | 333 | PHE | CZ | C4 | B | 2000 | 3.79 | van der Waals | B | 326-351 H: 5 | 337 | ARG | CZ | O5 | B | 2000 | 3.65 | van der Waals | B | 326-351 H: 5 | 337 | ARG | CZ | O6 | B | 2000 | 3.71 | van der Waals | B | 326-351 H: 5 | 337 | ARG | NH1 | C6 | B | 2000 | 3.73 | H.Bond | B | 326-351 H: 5 | 337 | ARG | NH1 | O5 | B | 2000 | 3.63 | H.Bond | B | 326-351 H: 5 | 337 | ARG | NH1 | O6 | B | 2000 | 2.91 | H.Bond | B | 326-351 H: 5 | 337 | ARG | NH2 | C6 | B | 2000 | 3.63 | H.Bond | B | 326-351 H: 5 | 337 | ARG | NH2 | O5 | B | 2000 | 2.79 | H.Bond | B | 326-351 H: 5 | 337 | ARG | NH2 | O6 | B | 2000 | 3.61 | H.Bond | B | Water | 4041 | HOH | O | O2 | B | 2000 | 2.95 | H.Bond | B | Water | 4110 | HOH | O | O4 | B | 2000 | 2.42 | H.Bond | B | Water | 4142 | HOH | O | O2 | B | 2000 | 2.68 | H.Bond | |
Nbr of Motifs per PDB entry | PDB Entry | Title | Determination Method | Resolution | R-Factor |
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4 | 1IXE | Citrate synthase | X-RAY | 2.30 | 0.177
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| Motif No./Chain | Mode | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / A |
> Structure: LHLLHHH
+2w
> Sequence: HNRHGHRDFR
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CIT /(405) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | No SSE | 184 | HIS | CB | C6 | A | 405 | 3.9 | van der Waals | A | No SSE | 184 | HIS | CB | O5 | A | 405 | 3.19 | van der Waals | A | No SSE | 184 | HIS | CG | O1 | A | 405 | 3.95 | van der Waals | A | No SSE | 184 | HIS | CG | O5 | A | 405 | 3.42 | van der Waals | A | No SSE | 184 | HIS | ND1 | O1 | A | 405 | 2.79 | H.Bond | A | No SSE | 184 | HIS | ND1 | O7 | A | 405 | 3.67 | H.Bond | A | No SSE | 184 | HIS | ND1 | C6 | A | 405 | 3.89 | H.Bond | A | No SSE | 184 | HIS | ND1 | O5 | A | 405 | 3.56 | H.Bond | A | No SSE | 184 | HIS | CE1 | O1 | A | 405 | 3.43 | van der Waals | A | No SSE | 184 | HIS | CE1 | O7 | A | 405 | 3.94 | van der Waals | A | 187-198 H: 1 | 187 | ASN | CA | O2 | A | 405 | 3.9 | van der Waals | A | 187-198 H: 1 | 187 | ASN | CB | C1 | A | 405 | 3.51 | van der Waals | A | 187-198 H: 1 | 187 | ASN | CB | O1 | A | 405 | 3.8 | van der Waals | A | 187-198 H: 1 | 187 | ASN | CB | O2 | A | 405 | 3.6 | van der Waals | A | 187-198 H: 1 | 187 | ASN | CB | C2 | A | 405 | 3.88 | van der Waals | A | 187-198 H: 1 | 187 | ASN | CB | O6 | A | 405 | 3.21 | van der Waals | A | 187-198 H: 1 | 187 | ASN | CG | O6 | A | 405 | 3.21 | van der Waals | A | 187-198 H: 1 | 187 | ASN | OD1 | O6 | A | 405 | 3.78 | H.Bond | A | 187-198 H: 1 | 187 | ASN | ND2 | O6 | A | 405 | 3.38 | H.Bond | A | No SSE | 218 | ARG | O | O3 | A | 405 | 3.97 | H.Bond | A | No SSE | 219 | HIS | CA | O3 | A | 405 | 3.21 | van der Waals | A | No SSE | 219 | HIS | C | O3 | A | 405 | 3.4 | van der Waals | A | No SSE | 219 | HIS | CB | O3 | A | 405 | 3.94 | van der Waals | A | No SSE | 219 | HIS | CG | O3 | A | 405 | 3.72 | van der Waals | A | No SSE | 219 | HIS | ND1 | C5 | A | 405 | 3.67 | H.Bond | A | No SSE | 219 | HIS | ND1 | O3 | A | 405 | 2.74 | H.Bond | A | No SSE | 219 | HIS | ND1 | O6 | A | 405 | 3.98 | H.Bond | A | No SSE | 219 | HIS | CE1 | O3 | A | 405 | 3.62 | van der Waals | A | No SSE | 219 | HIS | CE1 | O6 | A | 405 | 3.19 | van der Waals | A | No SSE | 220 | GLY | N | C5 | A | 405 | 3.09 | H.Bond | A | No SSE | 220 | GLY | N | O3 | A | 405 | 2.72 | H.Bond | A | No SSE | 220 | GLY | N | O4 | A | 405 | 3.07 | H.Bond | A | No SSE | 220 | GLY | CA | C5 | A | 405 | 3.69 | van der Waals | A | No SSE | 220 | GLY | CA | O3 | A | 405 | 3.75 | van der Waals | A | No SSE | 220 | GLY | CA | O4 | A | 405 | 3.41 | van der Waals | A | No SSE | 258 | HIS | CD2 | O7 | A | 405 | 3.61 | van der Waals | A | No SSE | 258 | HIS | CE1 | C1 | A | 405 | 3.63 | van der Waals | A | No SSE | 258 | HIS | CE1 | O1 | A | 405 | 3.27 | van der Waals | A | No SSE | 258 | HIS | CE1 | O7 | A | 405 | 3.74 | van der Waals | A | No SSE | 258 | HIS | NE2 | C1 | A | 405 | 3.65 | H.Bond | A | No SSE | 258 | HIS | NE2 | O1 | A | 405 | 3.37 | H.Bond | A | No SSE | 258 | HIS | NE2 | C2 | A | 405 | 3.92 | H.Bond | A | No SSE | 258 | HIS | NE2 | C3 | A | 405 | 3.85 | H.Bond | A | No SSE | 258 | HIS | NE2 | O7 | A | 405 | 2.74 | H.Bond | A | 265-280 H: 1 | 267 | ARG | CZ | O7 | A | 405 | 3.71 | van der Waals | A | 265-280 H: 1 | 267 | ARG | CZ | O5 | A | 405 | 3.66 | van der Waals | A | 265-280 H: 1 | 267 | ARG | NH1 | O7 | A | 405 | 3.66 | H.Bond | A | 265-280 H: 1 | 267 | ARG | NH1 | C6 | A | 405 | 3.78 | H.Bond | A | 265-280 H: 1 | 267 | ARG | NH1 | O5 | A | 405 | 2.68 | H.Bond | A | 265-280 H: 1 | 267 | ARG | NH2 | O7 | A | 405 | 2.88 | H.Bond | A | 265-280 H: 1 | 267 | ARG | NH2 | O5 | A | 405 | 3.8 | H.Bond | A | 311-322 H: 1 | 312 | ASP | CG | O4 | A | 405 | 3.67 | van der Waals | A | 311-322 H: 1 | 312 | ASP | OD1 | C5 | A | 405 | 3.85 | van der Waals | A | 311-322 H: 1 | 312 | ASP | OD1 | O4 | A | 405 | 2.63 | H.Bond | A | 328-352 H: 1 | 333 | PHE | CE2 | C4 | A | 405 | 3.99 | van der Waals | A | 328-352 H: 1 | 333 | PHE | CZ | C4 | A | 405 | 3.94 | van der Waals | A | 328-352 H: 1 | 333 | PHE | CZ | C6 | A | 405 | 3.9 | van der Waals | A | 328-352 H: 1 | 333 | PHE | CZ | O5 | A | 405 | 3.82 | van der Waals | A | 328-352 H: 1 | 333 | PHE | CZ | O6 | A | 405 | 3.85 | van der Waals | A | 328-352 H: 1 | 337 | ARG | CZ | O5 | A | 405 | 3.71 | van der Waals | A | 328-352 H: 1 | 337 | ARG | CZ | O6 | A | 405 | 3.66 | van der Waals | A | 328-352 H: 1 | 337 | ARG | NH1 | C6 | A | 405 | 3.84 | H.Bond | A | 328-352 H: 1 | 337 | ARG | NH1 | O5 | A | 405 | 3.78 | H.Bond | A | 328-352 H: 1 | 337 | ARG | NH1 | O6 | A | 405 | 2.98 | H.Bond | A | 328-352 H: 1 | 337 | ARG | NH2 | C6 | A | 405 | 3.55 | H.Bond | A | 328-352 H: 1 | 337 | ARG | NH2 | O5 | A | 405 | 2.78 | H.Bond | A | 328-352 H: 1 | 337 | ARG | NH2 | O6 | A | 405 | 3.45 | H.Bond | A | Water | 501 | HOH | O | O3 | A | 405 | 2.84 | H.Bond | A | Water | 503 | HOH | O | O2 | A | 405 | 2.91 | H.Bond | |
| 2 / B |
> Structure: LHLLHHH
+2w
> Sequence: HNHGHRVDFR
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CIT /(406) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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B | No SSE | 184 | HIS | CB | C6 | B | 406 | 3.79 | van der Waals | B | No SSE | 184 | HIS | CB | O5 | B | 406 | 3.1 | van der Waals | B | No SSE | 184 | HIS | CB | O6 | B | 406 | 3.96 | van der Waals | B | No SSE | 184 | HIS | CG | O5 | B | 406 | 3.35 | van der Waals | B | No SSE | 184 | HIS | ND1 | O1 | B | 406 | 2.87 | H.Bond | B | No SSE | 184 | HIS | ND1 | O7 | B | 406 | 3.79 | H.Bond | B | No SSE | 184 | HIS | ND1 | C6 | B | 406 | 3.74 | H.Bond | B | No SSE | 184 | HIS | ND1 | O5 | B | 406 | 3.44 | H.Bond | B | No SSE | 184 | HIS | CE1 | O1 | B | 406 | 3.46 | van der Waals | B | 187-198 H: 1 | 187 | ASN | CA | C1 | B | 406 | 3.99 | van der Waals | B | 187-198 H: 1 | 187 | ASN | CA | O2 | B | 406 | 3.84 | van der Waals | B | 187-198 H: 1 | 187 | ASN | CB | C1 | B | 406 | 3.26 | van der Waals | B | 187-198 H: 1 | 187 | ASN | CB | O1 | B | 406 | 3.39 | van der Waals | B | 187-198 H: 1 | 187 | ASN | CB | O2 | B | 406 | 3.58 | van der Waals | B | 187-198 H: 1 | 187 | ASN | CB | C2 | B | 406 | 3.56 | van der Waals | B | 187-198 H: 1 | 187 | ASN | CB | C6 | B | 406 | 3.89 | van der Waals | B | 187-198 H: 1 | 187 | ASN | CB | O6 | B | 406 | 3 | van der Waals | B | 187-198 H: 1 | 187 | ASN | CG | O6 | B | 406 | 2.87 | van der Waals | B | 187-198 H: 1 | 187 | ASN | OD1 | O6 | B | 406 | 3.45 | H.Bond | B | 187-198 H: 1 | 187 | ASN | ND2 | O6 | B | 406 | 3.01 | H.Bond | B | No SSE | 219 | HIS | CA | O3 | B | 406 | 3.33 | van der Waals | B | No SSE | 219 | HIS | C | C5 | B | 406 | 3.84 | van der Waals | B | No SSE | 219 | HIS | C | O3 | B | 406 | 2.83 | van der Waals | B | No SSE | 219 | HIS | O | C5 | B | 406 | 3.77 | van der Waals | B | No SSE | 219 | HIS | O | O3 | B | 406 | 2.77 | H.Bond | B | No SSE | 219 | HIS | ND1 | C2 | B | 406 | 3.65 | H.Bond | B | No SSE | 219 | HIS | ND1 | C4 | B | 406 | 3.5 | H.Bond | B | No SSE | 219 | HIS | ND1 | C5 | B | 406 | 3.8 | H.Bond | B | No SSE | 219 | HIS | ND1 | O3 | B | 406 | 3.28 | H.Bond | B | No SSE | 219 | HIS | CE1 | C2 | B | 406 | 3.52 | van der Waals | B | No SSE | 219 | HIS | CE1 | C3 | B | 406 | 3.94 | van der Waals | B | No SSE | 219 | HIS | CE1 | C4 | B | 406 | 3.48 | van der Waals | B | No SSE | 219 | HIS | CE1 | O6 | B | 406 | 3.29 | van der Waals | B | No SSE | 220 | GLY | N | O3 | B | 406 | 3.37 | H.Bond | B | No SSE | 220 | GLY | CA | O3 | B | 406 | 3.8 | van der Waals | B | No SSE | 258 | HIS | CD2 | O7 | B | 406 | 3.49 | van der Waals | B | No SSE | 258 | HIS | CE1 | C1 | B | 406 | 3.45 | van der Waals | B | No SSE | 258 | HIS | CE1 | O1 | B | 406 | 3.05 | van der Waals | B | No SSE | 258 | HIS | CE1 | O2 | B | 406 | 3.7 | van der Waals | B | No SSE | 258 | HIS | NE2 | C1 | B | 406 | 3.18 | H.Bond | B | No SSE | 258 | HIS | NE2 | O1 | B | 406 | 2.93 | H.Bond | B | No SSE | 258 | HIS | NE2 | O2 | B | 406 | 3.76 | H.Bond | B | No SSE | 258 | HIS | NE2 | C2 | B | 406 | 3.7 | H.Bond | B | No SSE | 258 | HIS | NE2 | C3 | B | 406 | 3.89 | H.Bond | B | No SSE | 258 | HIS | NE2 | O7 | B | 406 | 2.95 | H.Bond | B | 265-280 H: 1 | 267 | ARG | CZ | O7 | B | 406 | 3.58 | van der Waals | B | 265-280 H: 1 | 267 | ARG | CZ | O5 | B | 406 | 3.38 | van der Waals | B | 265-280 H: 1 | 267 | ARG | NH1 | O7 | B | 406 | 3.69 | H.Bond | B | 265-280 H: 1 | 267 | ARG | NH1 | C6 | B | 406 | 3.69 | H.Bond | B | 265-280 H: 1 | 267 | ARG | NH1 | O5 | B | 406 | 2.55 | H.Bond | B | 265-280 H: 1 | 267 | ARG | NH2 | C3 | B | 406 | 3.88 | H.Bond | B | 265-280 H: 1 | 267 | ARG | NH2 | O7 | B | 406 | 2.61 | H.Bond | B | 265-280 H: 1 | 267 | ARG | NH2 | O5 | B | 406 | 3.4 | H.Bond | B | 311-322 H: 1 | 311 | VAL | CG1 | O4 | B | 406 | 3 | van der Waals | B | 311-322 H: 1 | 312 | ASP | CG | C5 | B | 406 | 3.76 | van der Waals | B | 311-322 H: 1 | 312 | ASP | CG | O3 | B | 406 | 3.96 | van der Waals | B | 311-322 H: 1 | 312 | ASP | CG | O4 | B | 406 | 2.77 | van der Waals | B | 311-322 H: 1 | 312 | ASP | OD1 | C5 | B | 406 | 3.72 | van der Waals | B | 311-322 H: 1 | 312 | ASP | OD1 | O4 | B | 406 | 2.63 | H.Bond | B | 311-322 H: 1 | 312 | ASP | OD2 | C5 | B | 406 | 3.07 | van der Waals | B | 311-322 H: 1 | 312 | ASP | OD2 | O3 | B | 406 | 2.99 | H.Bond | B | 311-322 H: 1 | 312 | ASP | OD2 | O4 | B | 406 | 2.41 | H.Bond | B | 328-352 H: 1 | 333 | PHE | CE2 | C4 | B | 406 | 3.83 | van der Waals | B | 328-352 H: 1 | 333 | PHE | CE2 | C5 | B | 406 | 3.66 | van der Waals | B | 328-352 H: 1 | 333 | PHE | CE2 | O4 | B | 406 | 3.26 | van der Waals | B | 328-352 H: 1 | 333 | PHE | CZ | C4 | B | 406 | 3.62 | van der Waals | B | 328-352 H: 1 | 333 | PHE | CZ | O4 | B | 406 | 3.85 | van der Waals | B | 328-352 H: 1 | 333 | PHE | CZ | O5 | B | 406 | 3.93 | van der Waals | B | 328-352 H: 1 | 337 | ARG | CZ | O5 | B | 406 | 3.65 | van der Waals | B | 328-352 H: 1 | 337 | ARG | CZ | O6 | B | 406 | 3.61 | van der Waals | B | 328-352 H: 1 | 337 | ARG | NH1 | C6 | B | 406 | 3.6 | H.Bond | B | 328-352 H: 1 | 337 | ARG | NH1 | O5 | B | 406 | 3.57 | H.Bond | B | 328-352 H: 1 | 337 | ARG | NH1 | O6 | B | 406 | 2.77 | H.Bond | B | 328-352 H: 1 | 337 | ARG | NH2 | C6 | B | 406 | 3.65 | H.Bond | B | 328-352 H: 1 | 337 | ARG | NH2 | O5 | B | 406 | 2.86 | H.Bond | B | 328-352 H: 1 | 337 | ARG | NH2 | O6 | B | 406 | 3.59 | H.Bond | B | Water | 602 | HOH | O | O2 | B | 406 | 2.78 | H.Bond | B | Water | 603 | HOH | O | O2 | B | 406 | 2.79 | H.Bond | |
| 3 / C |
> Structure: LHLLHLH
+2w
> Sequence: HNHGHRNVDFR
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CIT /(407) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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C | No SSE | 184 | HIS | CB | C6 | C | 407 | 3.76 | van der Waals | C | No SSE | 184 | HIS | CB | O5 | C | 407 | 3.26 | van der Waals | C | No SSE | 184 | HIS | CB | O6 | C | 407 | 3.79 | van der Waals | C | No SSE | 184 | HIS | CG | C6 | C | 407 | 3.92 | van der Waals | C | No SSE | 184 | HIS | CG | O5 | C | 407 | 3.45 | van der Waals | C | No SSE | 184 | HIS | ND1 | C1 | C | 407 | 3.97 | H.Bond | C | No SSE | 184 | HIS | ND1 | O1 | C | 407 | 2.81 | H.Bond | C | No SSE | 184 | HIS | ND1 | O7 | C | 407 | 3.57 | H.Bond | C | No SSE | 184 | HIS | ND1 | C6 | C | 407 | 3.7 | H.Bond | C | No SSE | 184 | HIS | ND1 | O5 | C | 407 | 3.62 | H.Bond | C | No SSE | 184 | HIS | CE1 | O1 | C | 407 | 3.35 | van der Waals | C | No SSE | 184 | HIS | CE1 | O7 | C | 407 | 3.77 | van der Waals | C | 187-198 H: 1 | 187 | ASN | CA | O2 | C | 407 | 3.91 | van der Waals | C | 187-198 H: 1 | 187 | ASN | CB | C1 | C | 407 | 3.31 | van der Waals | C | 187-198 H: 1 | 187 | ASN | CB | O1 | C | 407 | 3.46 | van der Waals | C | 187-198 H: 1 | 187 | ASN | CB | O2 | C | 407 | 3.67 | van der Waals | C | 187-198 H: 1 | 187 | ASN | CB | C2 | C | 407 | 3.57 | van der Waals | C | 187-198 H: 1 | 187 | ASN | CB | C6 | C | 407 | 3.94 | van der Waals | C | 187-198 H: 1 | 187 | ASN | CB | O6 | C | 407 | 2.95 | van der Waals | C | 187-198 H: 1 | 187 | ASN | CG | O6 | C | 407 | 2.88 | van der Waals | C | 187-198 H: 1 | 187 | ASN | OD1 | O6 | C | 407 | 3.47 | H.Bond | C | 187-198 H: 1 | 187 | ASN | ND2 | O6 | C | 407 | 3.04 | H.Bond | C | No SSE | 219 | HIS | CA | O3 | C | 407 | 3.23 | van der Waals | C | No SSE | 219 | HIS | C | C5 | C | 407 | 3.97 | van der Waals | C | No SSE | 219 | HIS | C | O3 | C | 407 | 2.7 | van der Waals | C | No SSE | 219 | HIS | O | C5 | C | 407 | 3.69 | van der Waals | C | No SSE | 219 | HIS | O | O3 | C | 407 | 2.5 | H.Bond | C | No SSE | 219 | HIS | ND1 | C2 | C | 407 | 3.81 | H.Bond | C | No SSE | 219 | HIS | ND1 | C4 | C | 407 | 3.52 | H.Bond | C | No SSE | 219 | HIS | ND1 | C5 | C | 407 | 3.72 | H.Bond | C | No SSE | 219 | HIS | ND1 | O3 | C | 407 | 3.08 | H.Bond | C | No SSE | 219 | HIS | CE1 | C2 | C | 407 | 3.72 | van der Waals | C | No SSE | 219 | HIS | CE1 | C4 | C | 407 | 3.59 | van der Waals | C | No SSE | 219 | HIS | CE1 | O3 | C | 407 | 3.92 | van der Waals | C | No SSE | 219 | HIS | CE1 | C6 | C | 407 | 3.9 | van der Waals | C | No SSE | 219 | HIS | CE1 | O6 | C | 407 | 3.22 | van der Waals | C | No SSE | 220 | GLY | N | O3 | C | 407 | 3.37 | H.Bond | C | No SSE | 220 | GLY | CA | O3 | C | 407 | 3.81 | van der Waals | C | No SSE | 258 | HIS | CD2 | O7 | C | 407 | 3.7 | van der Waals | C | No SSE | 258 | HIS | CE1 | C1 | C | 407 | 3.57 | van der Waals | C | No SSE | 258 | HIS | CE1 | O1 | C | 407 | 3.21 | van der Waals | C | No SSE | 258 | HIS | CE1 | O2 | C | 407 | 3.79 | van der Waals | C | No SSE | 258 | HIS | NE2 | C1 | C | 407 | 3.51 | H.Bond | C | No SSE | 258 | HIS | NE2 | O1 | C | 407 | 3.24 | H.Bond | C | No SSE | 258 | HIS | NE2 | O7 | C | 407 | 2.99 | H.Bond | C | 265-278 H: 1 | 267 | ARG | CZ | O7 | C | 407 | 3.65 | van der Waals | C | 265-278 H: 1 | 267 | ARG | CZ | O5 | C | 407 | 3.52 | van der Waals | C | 265-278 H: 1 | 267 | ARG | NH1 | O7 | C | 407 | 3.71 | H.Bond | C | 265-278 H: 1 | 267 | ARG | NH1 | C6 | C | 407 | 3.71 | H.Bond | C | 265-278 H: 1 | 267 | ARG | NH1 | O5 | C | 407 | 2.6 | H.Bond | C | 265-278 H: 1 | 267 | ARG | NH2 | O7 | C | 407 | 2.74 | H.Bond | C | 265-278 H: 1 | 267 | ARG | NH2 | O5 | C | 407 | 3.58 | H.Bond | C | No SSE | 310 | ASN | CG | O4 | C | 407 | 3.95 | van der Waals | C | No SSE | 310 | ASN | OD1 | O4 | C | 407 | 3.86 | H.Bond | C | No SSE | 311 | VAL | CG1 | O4 | C | 407 | 3.71 | van der Waals | C | No SSE | 312 | ASP | CG | C5 | C | 407 | 3.79 | van der Waals | C | No SSE | 312 | ASP | CG | O3 | C | 407 | 3.94 | van der Waals | C | No SSE | 312 | ASP | CG | O4 | C | 407 | 3.14 | van der Waals | C | No SSE | 312 | ASP | OD1 | C5 | C | 407 | 3.13 | van der Waals | C | No SSE | 312 | ASP | OD1 | O3 | C | 407 | 3.05 | H.Bond | C | No SSE | 312 | ASP | OD1 | O4 | C | 407 | 2.57 | H.Bond | C | No SSE | 312 | ASP | OD2 | C5 | C | 407 | 3.75 | van der Waals | C | No SSE | 312 | ASP | OD2 | O4 | C | 407 | 3.32 | H.Bond | C | 328-352 H: 1 | 333 | PHE | CE2 | C4 | C | 407 | 3.8 | van der Waals | C | 328-352 H: 1 | 333 | PHE | CZ | C4 | C | 407 | 3.76 | van der Waals | C | 328-352 H: 1 | 333 | PHE | CZ | O5 | C | 407 | 3.69 | van der Waals | C | 328-352 H: 1 | 337 | ARG | CZ | O5 | C | 407 | 3.66 | van der Waals | C | 328-352 H: 1 | 337 | ARG | CZ | O6 | C | 407 | 3.66 | van der Waals | C | 328-352 H: 1 | 337 | ARG | NH1 | C6 | C | 407 | 3.7 | H.Bond | C | 328-352 H: 1 | 337 | ARG | NH1 | O5 | C | 407 | 3.65 | H.Bond | C | 328-352 H: 1 | 337 | ARG | NH1 | O6 | C | 407 | 2.89 | H.Bond | C | 328-352 H: 1 | 337 | ARG | NH2 | C6 | C | 407 | 3.61 | H.Bond | C | 328-352 H: 1 | 337 | ARG | NH2 | O5 | C | 407 | 2.8 | H.Bond | C | 328-352 H: 1 | 337 | ARG | NH2 | O6 | C | 407 | 3.56 | H.Bond | C | Water | 702 | HOH | O | O2 | C | 407 | 2.55 | H.Bond | C | Water | 703 | HOH | O | O2 | C | 407 | 2.73 | H.Bond | |
| 4 / D |
> Structure: LHLLHLHH
+2w
> Sequence: HNHGHRNVDFR
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CIT /(408) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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D | No SSE | 184 | HIS | O | O1 | D | 408 | 3.92 | H.Bond | D | No SSE | 184 | HIS | CB | C6 | D | 408 | 3.83 | van der Waals | D | No SSE | 184 | HIS | CB | O5 | D | 408 | 3.29 | van der Waals | D | No SSE | 184 | HIS | CB | O6 | D | 408 | 3.95 | van der Waals | D | No SSE | 184 | HIS | CG | O5 | D | 408 | 3.51 | van der Waals | D | No SSE | 184 | HIS | ND1 | O1 | D | 408 | 2.89 | H.Bond | D | No SSE | 184 | HIS | ND1 | O7 | D | 408 | 3.39 | H.Bond | D | No SSE | 184 | HIS | ND1 | C6 | D | 408 | 3.83 | H.Bond | D | No SSE | 184 | HIS | ND1 | O5 | D | 408 | 3.69 | H.Bond | D | No SSE | 184 | HIS | CE1 | O1 | D | 408 | 3.6 | van der Waals | D | No SSE | 184 | HIS | CE1 | O7 | D | 408 | 3.68 | van der Waals | D | 187-198 H: 1 | 187 | ASN | CA | C1 | D | 408 | 3.92 | van der Waals | D | 187-198 H: 1 | 187 | ASN | CA | O2 | D | 408 | 3.75 | van der Waals | D | 187-198 H: 1 | 187 | ASN | CB | C1 | D | 408 | 3.27 | van der Waals | D | 187-198 H: 1 | 187 | ASN | CB | O1 | D | 408 | 3.38 | van der Waals | D | 187-198 H: 1 | 187 | ASN | CB | O2 | D | 408 | 3.57 | van der Waals | D | 187-198 H: 1 | 187 | ASN | CB | C2 | D | 408 | 3.66 | van der Waals | D | 187-198 H: 1 | 187 | ASN | CB | O6 | D | 408 | 3.01 | van der Waals | D | 187-198 H: 1 | 187 | ASN | CG | O6 | D | 408 | 3.03 | van der Waals | D | 187-198 H: 1 | 187 | ASN | OD1 | O6 | D | 408 | 3.69 | H.Bond | D | 187-198 H: 1 | 187 | ASN | ND2 | O6 | D | 408 | 3.14 | H.Bond | D | No SSE | 219 | HIS | CA | O3 | D | 408 | 3.28 | van der Waals | D | No SSE | 219 | HIS | C | O3 | D | 408 | 2.91 | van der Waals | D | No SSE | 219 | HIS | O | C5 | D | 408 | 3.81 | van der Waals | D | No SSE | 219 | HIS | O | O3 | D | 408 | 2.63 | H.Bond | D | No SSE | 219 | HIS | ND1 | C2 | D | 408 | 3.88 | H.Bond | D | No SSE | 219 | HIS | ND1 | C4 | D | 408 | 3.97 | H.Bond | D | No SSE | 219 | HIS | ND1 | C5 | D | 408 | 3.98 | H.Bond | D | No SSE | 219 | HIS | ND1 | O3 | D | 408 | 3.25 | H.Bond | D | No SSE | 219 | HIS | ND1 | O6 | D | 408 | 3.98 | H.Bond | D | No SSE | 219 | HIS | CE1 | C2 | D | 408 | 3.81 | van der Waals | D | No SSE | 219 | HIS | CE1 | C6 | D | 408 | 3.96 | van der Waals | D | No SSE | 219 | HIS | CE1 | O6 | D | 408 | 3.1 | van der Waals | D | No SSE | 220 | GLY | N | O3 | D | 408 | 3.71 | H.Bond | D | No SSE | 258 | HIS | CD2 | O7 | D | 408 | 3.53 | van der Waals | D | No SSE | 258 | HIS | CE1 | C1 | D | 408 | 3.4 | van der Waals | D | No SSE | 258 | HIS | CE1 | O1 | D | 408 | 3.11 | van der Waals | D | No SSE | 258 | HIS | CE1 | O2 | D | 408 | 3.6 | van der Waals | D | No SSE | 258 | HIS | CE1 | O7 | D | 408 | 3.97 | van der Waals | D | No SSE | 258 | HIS | NE2 | C1 | D | 408 | 3.26 | H.Bond | D | No SSE | 258 | HIS | NE2 | O1 | D | 408 | 3.07 | H.Bond | D | No SSE | 258 | HIS | NE2 | O2 | D | 408 | 3.81 | H.Bond | D | No SSE | 258 | HIS | NE2 | C2 | D | 408 | 3.69 | H.Bond | D | No SSE | 258 | HIS | NE2 | C3 | D | 408 | 3.82 | H.Bond | D | No SSE | 258 | HIS | NE2 | O7 | D | 408 | 2.85 | H.Bond | D | 265-277 H: 1 | 267 | ARG | CZ | O7 | D | 408 | 3.58 | van der Waals | D | 265-277 H: 1 | 267 | ARG | CZ | O5 | D | 408 | 3.63 | van der Waals | D | 265-277 H: 1 | 267 | ARG | NH1 | O7 | D | 408 | 3.57 | H.Bond | D | 265-277 H: 1 | 267 | ARG | NH1 | C6 | D | 408 | 3.72 | H.Bond | D | 265-277 H: 1 | 267 | ARG | NH1 | O5 | D | 408 | 2.64 | H.Bond | D | 265-277 H: 1 | 267 | ARG | NH2 | O7 | D | 408 | 2.73 | H.Bond | D | 265-277 H: 1 | 267 | ARG | NH2 | O5 | D | 408 | 3.76 | H.Bond | D | No SSE | 310 | ASN | CG | O4 | D | 408 | 3.99 | van der Waals | D | 311-322 H: 1 | 311 | VAL | CG1 | C4 | D | 408 | 3.8 | van der Waals | D | 311-322 H: 1 | 311 | VAL | CG1 | O4 | D | 408 | 3.95 | van der Waals | D | 311-322 H: 1 | 312 | ASP | CG | C5 | D | 408 | 3.89 | van der Waals | D | 311-322 H: 1 | 312 | ASP | CG | O4 | D | 408 | 3.66 | van der Waals | D | 311-322 H: 1 | 312 | ASP | OD1 | C5 | D | 408 | 2.94 | van der Waals | D | 311-322 H: 1 | 312 | ASP | OD1 | O3 | D | 408 | 2.97 | H.Bond | D | 311-322 H: 1 | 312 | ASP | OD1 | O4 | D | 408 | 2.75 | H.Bond | D | 328-352 H: 1 | 333 | PHE | CZ | C4 | D | 408 | 3.95 | van der Waals | D | 328-352 H: 1 | 333 | PHE | CZ | C6 | D | 408 | 3.96 | van der Waals | D | 328-352 H: 1 | 333 | PHE | CZ | O5 | D | 408 | 3.63 | van der Waals | D | 328-352 H: 1 | 337 | ARG | CZ | O5 | D | 408 | 3.58 | van der Waals | D | 328-352 H: 1 | 337 | ARG | CZ | O6 | D | 408 | 3.81 | van der Waals | D | 328-352 H: 1 | 337 | ARG | NH1 | C6 | D | 408 | 3.6 | H.Bond | D | 328-352 H: 1 | 337 | ARG | NH1 | O5 | D | 408 | 3.4 | H.Bond | D | 328-352 H: 1 | 337 | ARG | NH1 | O6 | D | 408 | 2.89 | H.Bond | D | 328-352 H: 1 | 337 | ARG | NH2 | C6 | D | 408 | 3.8 | H.Bond | D | 328-352 H: 1 | 337 | ARG | NH2 | O5 | D | 408 | 2.86 | H.Bond | D | 328-352 H: 1 | 337 | ARG | NH2 | O6 | D | 408 | 3.85 | H.Bond | D | Water | 802 | HOH | O | O2 | D | 408 | 2.64 | H.Bond | D | Water | 803 | HOH | O | O2 | D | 408 | 2.66 | H.Bond | |
Nbr of Motifs per PDB entry | PDB Entry | Title | Determination Method | Resolution | R-Factor |
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4 | 2C6X | Citrate synthase | X-RAY | 3.40 | 0.284
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| Motif No./Chain | Mode | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / A |
> Structure: LLHLHHH
> Sequence: HMNHGRER
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CIT /(1366) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | No SSE | 178 | HIS | CB | O5 | A | 1366 | 3.23 | van der Waals | A | No SSE | 178 | HIS | CG | O5 | A | 1366 | 2.85 | van der Waals | A | No SSE | 178 | HIS | ND1 | O5 | A | 1366 | 3.15 | H.Bond | A | No SSE | 178 | HIS | CD2 | O5 | A | 1366 | 3.14 | van der Waals | A | No SSE | 178 | HIS | CE1 | O5 | A | 1366 | 3.56 | van der Waals | A | No SSE | 178 | HIS | NE2 | O5 | A | 1366 | 3.55 | H.Bond | A | No SSE | 180 | MET | O | O2 | A | 1366 | 3.82 | H.Bond | A | 181-192 H: 1 | 181 | ASN | CA | O2 | A | 1366 | 3.64 | van der Waals | A | 181-192 H: 1 | 181 | ASN | CB | C1 | A | 1366 | 3.79 | van der Waals | A | 181-192 H: 1 | 181 | ASN | CB | O2 | A | 1366 | 2.93 | van der Waals | A | 181-192 H: 1 | 181 | ASN | CB | C2 | A | 1366 | 3.76 | van der Waals | A | No SSE | 213 | HIS | CD2 | C4 | A | 1366 | 3.51 | van der Waals | A | No SSE | 213 | HIS | CD2 | O6 | A | 1366 | 3.8 | van der Waals | A | No SSE | 213 | HIS | NE2 | C4 | A | 1366 | 3.86 | H.Bond | A | No SSE | 213 | HIS | NE2 | O6 | A | 1366 | 3.36 | H.Bond | A | No SSE | 214 | GLY | N | O3 | A | 1366 | 3.21 | H.Bond | A | No SSE | 214 | GLY | CA | O3 | A | 1366 | 3.95 | van der Waals | A | 259-272 H: 1 | 261 | ARG | CZ | O7 | A | 1366 | 3.95 | van der Waals | A | 259-272 H: 1 | 261 | ARG | NH1 | O7 | A | 1366 | 3.55 | H.Bond | A | 259-272 H: 1 | 261 | ARG | NH1 | O5 | A | 1366 | 3.36 | H.Bond | A | 259-272 H: 1 | 261 | ARG | NH2 | O7 | A | 1366 | 3.5 | H.Bond | A | 306-317 H: 1 | 307 | GLU | OE2 | C5 | A | 1366 | 3.97 | van der Waals | A | 306-317 H: 1 | 307 | GLU | OE2 | O3 | A | 1366 | 3.87 | H.Bond | A | 306-317 H: 1 | 307 | GLU | OE2 | O4 | A | 1366 | 3.2 | H.Bond | A | 323-344 H: 1 | 332 | ARG | CZ | O6 | A | 1366 | 3.67 | van der Waals | A | 323-344 H: 1 | 332 | ARG | NH1 | O6 | A | 1366 | 3.55 | H.Bond | A | 323-344 H: 1 | 332 | ARG | NH2 | C6 | A | 1366 | 3.59 | H.Bond | A | 323-344 H: 1 | 332 | ARG | NH2 | O5 | A | 1366 | 3.47 | H.Bond | A | 323-344 H: 1 | 332 | ARG | NH2 | O6 | A | 1366 | 2.89 | H.Bond | |
| 2 / B |
> Structure: LLHLHHH
> Sequence: HMNHGRER
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CIT /(1366) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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B | No SSE | 178 | HIS | CB | O5 | B | 1366 | 3.23 | van der Waals | B | No SSE | 178 | HIS | CG | O5 | B | 1366 | 2.85 | van der Waals | B | No SSE | 178 | HIS | ND1 | O5 | B | 1366 | 3.15 | H.Bond | B | No SSE | 178 | HIS | CD2 | O5 | B | 1366 | 3.14 | van der Waals | B | No SSE | 178 | HIS | CE1 | O5 | B | 1366 | 3.56 | van der Waals | B | No SSE | 178 | HIS | NE2 | O5 | B | 1366 | 3.55 | H.Bond | B | No SSE | 180 | MET | O | O2 | B | 1366 | 3.82 | H.Bond | B | 181-192 H: 1 | 181 | ASN | CA | O2 | B | 1366 | 3.64 | van der Waals | B | 181-192 H: 1 | 181 | ASN | CB | C1 | B | 1366 | 3.79 | van der Waals | B | 181-192 H: 1 | 181 | ASN | CB | O2 | B | 1366 | 2.93 | van der Waals | B | 181-192 H: 1 | 181 | ASN | CB | C2 | B | 1366 | 3.76 | van der Waals | B | No SSE | 213 | HIS | CD2 | C4 | B | 1366 | 3.51 | van der Waals | B | No SSE | 213 | HIS | CD2 | O6 | B | 1366 | 3.8 | van der Waals | B | No SSE | 213 | HIS | NE2 | C4 | B | 1366 | 3.86 | H.Bond | B | No SSE | 213 | HIS | NE2 | O6 | B | 1366 | 3.36 | H.Bond | B | No SSE | 214 | GLY | N | O3 | B | 1366 | 3.21 | H.Bond | B | No SSE | 214 | GLY | CA | O3 | B | 1366 | 3.95 | van der Waals | B | 259-272 H: 1 | 261 | ARG | CZ | O7 | B | 1366 | 3.95 | van der Waals | B | 259-272 H: 1 | 261 | ARG | NH1 | O7 | B | 1366 | 3.55 | H.Bond | B | 259-272 H: 1 | 261 | ARG | NH1 | O5 | B | 1366 | 3.36 | H.Bond | B | 259-272 H: 1 | 261 | ARG | NH2 | O7 | B | 1366 | 3.5 | H.Bond | B | 306-317 H: 1 | 307 | GLU | OE2 | C5 | B | 1366 | 3.97 | van der Waals | B | 306-317 H: 1 | 307 | GLU | OE2 | O3 | B | 1366 | 3.87 | H.Bond | B | 306-317 H: 1 | 307 | GLU | OE2 | O4 | B | 1366 | 3.2 | H.Bond | B | 323-344 H: 1 | 332 | ARG | CZ | O6 | B | 1366 | 3.67 | van der Waals | B | 323-344 H: 1 | 332 | ARG | NH1 | O6 | B | 1366 | 3.55 | H.Bond | B | 323-344 H: 1 | 332 | ARG | NH2 | C6 | B | 1366 | 3.59 | H.Bond | B | 323-344 H: 1 | 332 | ARG | NH2 | O5 | B | 1366 | 3.47 | H.Bond | B | 323-344 H: 1 | 332 | ARG | NH2 | O6 | B | 1366 | 2.89 | H.Bond | |
| 3 / C |
> Structure: LLHLHHH
> Sequence: HMNHGRER
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CIT /(1366) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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C | No SSE | 178 | HIS | CB | O5 | C | 1366 | 3.23 | van der Waals | C | No SSE | 178 | HIS | CG | O5 | C | 1366 | 2.85 | van der Waals | C | No SSE | 178 | HIS | ND1 | O5 | C | 1366 | 3.15 | H.Bond | C | No SSE | 178 | HIS | CD2 | O5 | C | 1366 | 3.14 | van der Waals | C | No SSE | 178 | HIS | CE1 | O5 | C | 1366 | 3.56 | van der Waals | C | No SSE | 178 | HIS | NE2 | O5 | C | 1366 | 3.55 | H.Bond | C | No SSE | 180 | MET | O | O2 | C | 1366 | 3.82 | H.Bond | C | 181-192 H: 1 | 181 | ASN | CA | O2 | C | 1366 | 3.64 | van der Waals | C | 181-192 H: 1 | 181 | ASN | CB | C1 | C | 1366 | 3.79 | van der Waals | C | 181-192 H: 1 | 181 | ASN | CB | O2 | C | 1366 | 2.93 | van der Waals | C | 181-192 H: 1 | 181 | ASN | CB | C2 | C | 1366 | 3.76 | van der Waals | C | No SSE | 213 | HIS | CD2 | C4 | C | 1366 | 3.51 | van der Waals | C | No SSE | 213 | HIS | CD2 | O6 | C | 1366 | 3.8 | van der Waals | C | No SSE | 213 | HIS | NE2 | C4 | C | 1366 | 3.86 | H.Bond | C | No SSE | 213 | HIS | NE2 | O6 | C | 1366 | 3.36 | H.Bond | C | No SSE | 214 | GLY | N | O3 | C | 1366 | 3.21 | H.Bond | C | No SSE | 214 | GLY | CA | O3 | C | 1366 | 3.95 | van der Waals | C | 259-272 H: 1 | 261 | ARG | CZ | O7 | C | 1366 | 3.95 | van der Waals | C | 259-272 H: 1 | 261 | ARG | NH1 | O7 | C | 1366 | 3.55 | H.Bond | C | 259-272 H: 1 | 261 | ARG | NH1 | O5 | C | 1366 | 3.36 | H.Bond | C | 259-272 H: 1 | 261 | ARG | NH2 | O7 | C | 1366 | 3.5 | H.Bond | C | 306-317 H: 1 | 307 | GLU | OE2 | C5 | C | 1366 | 3.97 | van der Waals | C | 306-317 H: 1 | 307 | GLU | OE2 | O3 | C | 1366 | 3.87 | H.Bond | C | 306-317 H: 1 | 307 | GLU | OE2 | O4 | C | 1366 | 3.2 | H.Bond | C | 323-344 H: 1 | 332 | ARG | CZ | O6 | C | 1366 | 3.67 | van der Waals | C | 323-344 H: 1 | 332 | ARG | NH1 | O6 | C | 1366 | 3.55 | H.Bond | C | 323-344 H: 1 | 332 | ARG | NH2 | C6 | C | 1366 | 3.59 | H.Bond | C | 323-344 H: 1 | 332 | ARG | NH2 | O5 | C | 1366 | 3.47 | H.Bond | C | 323-344 H: 1 | 332 | ARG | NH2 | O6 | C | 1366 | 2.89 | H.Bond | |
| 4 / D |
> Structure: LLHLHHH
> Sequence: HMNHGRER
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CIT /(1366) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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D | No SSE | 178 | HIS | CB | O5 | D | 1366 | 3.23 | van der Waals | D | No SSE | 178 | HIS | CG | O5 | D | 1366 | 2.85 | van der Waals | D | No SSE | 178 | HIS | ND1 | O5 | D | 1366 | 3.15 | H.Bond | D | No SSE | 178 | HIS | CD2 | O5 | D | 1366 | 3.14 | van der Waals | D | No SSE | 178 | HIS | CE1 | O5 | D | 1366 | 3.56 | van der Waals | D | No SSE | 178 | HIS | NE2 | O5 | D | 1366 | 3.55 | H.Bond | D | No SSE | 180 | MET | O | O2 | D | 1366 | 3.82 | H.Bond | D | 181-192 H: 1 | 181 | ASN | CA | O2 | D | 1366 | 3.64 | van der Waals | D | 181-192 H: 1 | 181 | ASN | CB | C1 | D | 1366 | 3.79 | van der Waals | D | 181-192 H: 1 | 181 | ASN | CB | O2 | D | 1366 | 2.93 | van der Waals | D | 181-192 H: 1 | 181 | ASN | CB | C2 | D | 1366 | 3.76 | van der Waals | D | No SSE | 213 | HIS | CD2 | C4 | D | 1366 | 3.51 | van der Waals | D | No SSE | 213 | HIS | CD2 | O6 | D | 1366 | 3.8 | van der Waals | D | No SSE | 213 | HIS | NE2 | C4 | D | 1366 | 3.86 | H.Bond | D | No SSE | 213 | HIS | NE2 | O6 | D | 1366 | 3.36 | H.Bond | D | No SSE | 214 | GLY | N | O3 | D | 1366 | 3.21 | H.Bond | D | No SSE | 214 | GLY | CA | O3 | D | 1366 | 3.96 | van der Waals | D | 259-272 H: 1 | 261 | ARG | CZ | O7 | D | 1366 | 3.95 | van der Waals | D | 259-272 H: 1 | 261 | ARG | NH1 | O7 | D | 1366 | 3.55 | H.Bond | D | 259-272 H: 1 | 261 | ARG | NH1 | O5 | D | 1366 | 3.36 | H.Bond | D | 259-272 H: 1 | 261 | ARG | NH2 | O7 | D | 1366 | 3.5 | H.Bond | D | 306-317 H: 1 | 307 | GLU | OE2 | C5 | D | 1366 | 3.97 | van der Waals | D | 306-317 H: 1 | 307 | GLU | OE2 | O3 | D | 1366 | 3.87 | H.Bond | D | 306-317 H: 1 | 307 | GLU | OE2 | O4 | D | 1366 | 3.2 | H.Bond | D | 323-344 H: 1 | 332 | ARG | CZ | O6 | D | 1366 | 3.67 | van der Waals | D | 323-344 H: 1 | 332 | ARG | NH1 | O6 | D | 1366 | 3.55 | H.Bond | D | 323-344 H: 1 | 332 | ARG | NH2 | C6 | D | 1366 | 3.59 | H.Bond | D | 323-344 H: 1 | 332 | ARG | NH2 | O5 | D | 1366 | 3.47 | H.Bond | D | 323-344 H: 1 | 332 | ARG | NH2 | O6 | D | 1366 | 2.89 | H.Bond | |
Nbr of Motifs per PDB entry | PDB Entry | Title | Determination Method | Resolution | R-Factor |
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1 | 6CSC | Citrate synthase | X-RAY | 2.25 | 0.158
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| Motif No./Chain | Mode | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / A |
> Structure: LLLLHLHH
+1w
> Sequence: HNHHRNDFR
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CIT /(701) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | No SSE | 238 | HIS | CB | C6 | A | 701 | 3.68 | van der Waals | A | No SSE | 238 | HIS | CB | O5 | A | 701 | 3.85 | van der Waals | A | No SSE | 238 | HIS | CB | O6 | A | 701 | 3.2 | van der Waals | A | No SSE | 238 | HIS | CG | O2 | A | 701 | 3.65 | van der Waals | A | No SSE | 238 | HIS | CG | C6 | A | 701 | 3.84 | van der Waals | A | No SSE | 238 | HIS | CG | O6 | A | 701 | 3.33 | van der Waals | A | No SSE | 238 | HIS | ND1 | C1 | A | 701 | 3.71 | H.Bond | A | No SSE | 238 | HIS | ND1 | O2 | A | 701 | 2.51 | H.Bond | A | No SSE | 238 | HIS | ND1 | C3 | A | 701 | 3.84 | H.Bond | A | No SSE | 238 | HIS | ND1 | O7 | A | 701 | 3.37 | H.Bond | A | No SSE | 238 | HIS | ND1 | C6 | A | 701 | 3.4 | H.Bond | A | No SSE | 238 | HIS | ND1 | O6 | A | 701 | 3.25 | H.Bond | A | No SSE | 238 | HIS | CE1 | O2 | A | 701 | 3.32 | van der Waals | A | No SSE | 238 | HIS | CE1 | O7 | A | 701 | 3.61 | van der Waals | A | No SSE | 242 | ASN | CA | O1 | A | 701 | 3.62 | van der Waals | A | No SSE | 242 | ASN | CB | C1 | A | 701 | 3.15 | van der Waals | A | No SSE | 242 | ASN | CB | O1 | A | 701 | 3.07 | van der Waals | A | No SSE | 242 | ASN | CB | O2 | A | 701 | 3.51 | van der Waals | A | No SSE | 242 | ASN | CB | C2 | A | 701 | 3.73 | van der Waals | A | No SSE | 242 | ASN | CB | O5 | A | 701 | 3.08 | van der Waals | A | No SSE | 242 | ASN | CG | O5 | A | 701 | 2.98 | van der Waals | A | No SSE | 242 | ASN | OD1 | O5 | A | 701 | 3.41 | H.Bond | A | No SSE | 242 | ASN | ND2 | O5 | A | 701 | 3.42 | H.Bond | A | No SSE | 274 | HIS | CA | O3 | A | 701 | 3.74 | van der Waals | A | No SSE | 274 | HIS | C | O3 | A | 701 | 3.57 | van der Waals | A | No SSE | 274 | HIS | O | O3 | A | 701 | 3.61 | H.Bond | A | No SSE | 274 | HIS | ND1 | C2 | A | 701 | 3.73 | H.Bond | A | No SSE | 274 | HIS | ND1 | C4 | A | 701 | 3.8 | H.Bond | A | No SSE | 274 | HIS | ND1 | C5 | A | 701 | 3.91 | H.Bond | A | No SSE | 274 | HIS | ND1 | O3 | A | 701 | 3.08 | H.Bond | A | No SSE | 274 | HIS | CE1 | C2 | A | 701 | 3.48 | van der Waals | A | No SSE | 274 | HIS | CE1 | C3 | A | 701 | 3.96 | van der Waals | A | No SSE | 274 | HIS | CE1 | C4 | A | 701 | 3.71 | van der Waals | A | No SSE | 274 | HIS | CE1 | O3 | A | 701 | 3.8 | van der Waals | A | No SSE | 274 | HIS | CE1 | O5 | A | 701 | 3.31 | van der Waals | A | No SSE | 320 | HIS | CD2 | O7 | A | 701 | 3.35 | van der Waals | A | No SSE | 320 | HIS | CE1 | C1 | A | 701 | 3.58 | van der Waals | A | No SSE | 320 | HIS | CE1 | O1 | A | 701 | 3.79 | van der Waals | A | No SSE | 320 | HIS | CE1 | O2 | A | 701 | 3.19 | van der Waals | A | No SSE | 320 | HIS | NE2 | C1 | A | 701 | 3.26 | H.Bond | A | No SSE | 320 | HIS | NE2 | O1 | A | 701 | 3.82 | H.Bond | A | No SSE | 320 | HIS | NE2 | O2 | A | 701 | 2.94 | H.Bond | A | No SSE | 320 | HIS | NE2 | C2 | A | 701 | 3.78 | H.Bond | A | No SSE | 320 | HIS | NE2 | C3 | A | 701 | 3.86 | H.Bond | A | No SSE | 320 | HIS | NE2 | O7 | A | 701 | 2.8 | H.Bond | A | 328-340 H: 1 | 329 | ARG | CZ | O7 | A | 701 | 3.88 | van der Waals | A | 328-340 H: 1 | 329 | ARG | CZ | O6 | A | 701 | 3.39 | van der Waals | A | 328-340 H: 1 | 329 | ARG | NH1 | C6 | A | 701 | 3.75 | H.Bond | A | 328-340 H: 1 | 329 | ARG | NH1 | O6 | A | 701 | 2.59 | H.Bond | A | 328-340 H: 1 | 329 | ARG | NH2 | C3 | A | 701 | 3.84 | H.Bond | A | 328-340 H: 1 | 329 | ARG | NH2 | O7 | A | 701 | 2.8 | H.Bond | A | 328-340 H: 1 | 329 | ARG | NH2 | C6 | A | 701 | 3.97 | H.Bond | A | 328-340 H: 1 | 329 | ARG | NH2 | O6 | A | 701 | 3.34 | H.Bond | A | No SSE | 373 | ASN | CG | O4 | A | 701 | 3.94 | van der Waals | A | 374-376 H: 5 | 375 | ASP | OD2 | C5 | A | 701 | 3.29 | van der Waals | A | 374-376 H: 5 | 375 | ASP | OD2 | O3 | A | 701 | 3.32 | H.Bond | A | 374-376 H: 5 | 375 | ASP | OD2 | O4 | A | 701 | 3.24 | H.Bond | A | 390-414 H: 5 | 397 | PHE | CZ | C4 | A | 701 | 3.91 | van der Waals | A | 390-414 H: 5 | 401 | ARG | CZ | O5 | A | 701 | 3.71 | van der Waals | A | 390-414 H: 5 | 401 | ARG | CZ | O6 | A | 701 | 3.62 | van der Waals | A | 390-414 H: 5 | 401 | ARG | NH1 | C6 | A | 701 | 3.68 | H.Bond | A | 390-414 H: 5 | 401 | ARG | NH1 | O5 | A | 701 | 2.95 | H.Bond | A | 390-414 H: 5 | 401 | ARG | NH1 | O6 | A | 701 | 3.67 | H.Bond | A | 390-414 H: 5 | 401 | ARG | NH2 | C6 | A | 701 | 3.48 | H.Bond | A | 390-414 H: 5 | 401 | ARG | NH2 | O5 | A | 701 | 3.54 | H.Bond | A | 390-414 H: 5 | 401 | ARG | NH2 | O6 | A | 701 | 2.7 | H.Bond | A | Water | 751 | HOH | O | O1 | A | 701 | 2.91 | H.Bond | |