There are 8 SFM Motifs: |
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Nbr of Motifs per PDB entry | PDB Entry | Title | Determination Method | Resolution | R-Factor |
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3 | 2BWN | SUCCINYL-CoA-Synthetase | X-RAY | 2.10 | 0.161
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| Motif No./Chain | Mode | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / A |
> Structure: SLLLSLL
> Sequence: RFPVWCGDTH
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SIN /(1398) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | 25-28 S: 0 | 28 | ARG | CD | O2 | A | 1398 | 3.49 | van der Waals | A | 25-28 S: 0 | 28 | ARG | NH1 | C1 | A | 1398 | 3.3 | H.Bond | A | 25-28 S: 0 | 28 | ARG | NH1 | O1 | A | 1398 | 2.84 | H.Bond | A | 25-28 S: 0 | 28 | ARG | NH1 | O2 | A | 1398 | 3.17 | H.Bond | A | No SSE | 33 | PHE | CD2 | O1 | A | 1398 | 3.66 | van der Waals | A | No SSE | 34 | PRO | CA | O2 | A | 1398 | 3.95 | van der Waals | A | 45-50 S: -1 | 50 | VAL | O | C3 | A | 1398 | 3.76 | van der Waals | A | 45-50 S: -1 | 50 | VAL | O | O3 | A | 1398 | 3.68 | H.Bond | A | 45-50 S: -1 | 50 | VAL | CG1 | C3 | A | 1398 | 3.64 | van der Waals | A | No SSE | 51 | TRP | CA | O3 | A | 1398 | 3.67 | van der Waals | A | No SSE | 51 | TRP | C | O3 | A | 1398 | 3.28 | van der Waals | A | No SSE | 51 | TRP | O | O3 | A | 1398 | 3.67 | H.Bond | A | No SSE | 52 | CYS | N | O3 | A | 1398 | 3.31 | H.Bond | A | No SSE | 52 | CYS | CA | O3 | A | 1398 | 3.96 | van der Waals | A | No SSE | 52 | CYS | C | O3 | A | 1398 | 3.85 | van der Waals | A | No SSE | 53 | GLY | N | C3 | A | 1398 | 3.99 | H.Bond | A | No SSE | 53 | GLY | N | C4 | A | 1398 | 3.49 | H.Bond | A | No SSE | 53 | GLY | N | O3 | A | 1398 | 3.05 | H.Bond | A | No SSE | 53 | GLY | CA | C4 | A | 1398 | 3.77 | van der Waals | A | No SSE | 53 | GLY | CA | O3 | A | 1398 | 3.81 | van der Waals | A | No SSE | 53 | GLY | C | C4 | A | 1398 | 3.85 | van der Waals | A | No SSE | 53 | GLY | C | O4 | A | 1398 | 3.71 | van der Waals | A | No SSE | 53 | GLY | O | C4 | A | 1398 | 3.49 | van der Waals | A | No SSE | 53 | GLY | O | O3 | A | 1398 | 3.65 | H.Bond | A | No SSE | 53 | GLY | O | O4 | A | 1398 | 3.12 | H.Bond | A | No SSE | 55 | ASP | O | C1 | A | 1398 | 3.98 | van der Waals | A | No SSE | 55 | ASP | O | O1 | A | 1398 | 3.13 | H.Bond | A | No SSE | 55 | ASP | O | C2 | A | 1398 | 3.95 | van der Waals | A | No SSE | 55 | ASP | O | O4 | A | 1398 | 3.86 | H.Bond | A | No SSE | 55 | ASP | CB | O1 | A | 1398 | 3.5 | van der Waals | A | No SSE | 55 | ASP | CG | O1 | A | 1398 | 3.72 | van der Waals | A | No SSE | 55 | ASP | OD2 | O1 | A | 1398 | 3.32 | H.Bond | A | No SSE | 376 | THR | O | C4 | A | 1398 | 3.43 | van der Waals | A | No SSE | 376 | THR | O | O3 | A | 1398 | 3.16 | H.Bond | A | No SSE | 376 | THR | O | O4 | A | 1398 | 3.1 | H.Bond | A | No SSE | 376 | THR | CB | O3 | A | 1398 | 3.81 | van der Waals | A | No SSE | 376 | THR | CB | O4 | A | 1398 | 3.85 | van der Waals | A | No SSE | 376 | THR | OG1 | C4 | A | 1398 | 3.22 | van der Waals | A | No SSE | 376 | THR | OG1 | O3 | A | 1398 | 2.58 | H.Bond | A | No SSE | 376 | THR | OG1 | O4 | A | 1398 | 3.21 | H.Bond | A | No SSE | 381 | HIS | CE1 | C3 | A | 1398 | 3.94 | van der Waals | A | No SSE | 381 | HIS | CE1 | C4 | A | 1398 | 3.7 | van der Waals | A | No SSE | 381 | HIS | CE1 | O3 | A | 1398 | 3.52 | van der Waals | |
| 2 / D |
> Structure: SLLLSLL
+1w
> Sequence: RFPVWCGDTH
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SIN /(1399) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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D | 25-28 S: 0 | 28 | ARG | CD | O4 | D | 1399 | 3.68 | van der Waals | D | 25-28 S: 0 | 28 | ARG | NH1 | C4 | D | 1399 | 3.43 | H.Bond | D | 25-28 S: 0 | 28 | ARG | NH1 | O3 | D | 1399 | 3.61 | H.Bond | D | 25-28 S: 0 | 28 | ARG | NH1 | O4 | D | 1399 | 3.42 | H.Bond | D | No SSE | 33 | PHE | CB | O3 | D | 1399 | 3.95 | van der Waals | D | No SSE | 33 | PHE | CB | O4 | D | 1399 | 3.97 | van der Waals | D | No SSE | 33 | PHE | CG | O4 | D | 1399 | 3.97 | van der Waals | D | No SSE | 33 | PHE | CD2 | O3 | D | 1399 | 3.67 | van der Waals | D | No SSE | 34 | PRO | CA | O4 | D | 1399 | 3.73 | van der Waals | D | 45-50 S: -1 | 50 | VAL | O | O1 | D | 1399 | 3.78 | H.Bond | D | 45-50 S: -1 | 50 | VAL | O | C2 | D | 1399 | 3.9 | van der Waals | D | No SSE | 51 | TRP | CA | O1 | D | 1399 | 3.81 | van der Waals | D | No SSE | 51 | TRP | C | O1 | D | 1399 | 3.41 | van der Waals | D | No SSE | 51 | TRP | O | O1 | D | 1399 | 3.78 | H.Bond | D | No SSE | 52 | CYS | N | O1 | D | 1399 | 3.39 | H.Bond | D | No SSE | 52 | CYS | CA | O1 | D | 1399 | 3.99 | van der Waals | D | No SSE | 52 | CYS | C | O1 | D | 1399 | 3.8 | van der Waals | D | No SSE | 53 | GLY | N | C1 | D | 1399 | 3.7 | H.Bond | D | No SSE | 53 | GLY | N | O1 | D | 1399 | 2.97 | H.Bond | D | No SSE | 53 | GLY | CA | C1 | D | 1399 | 3.96 | van der Waals | D | No SSE | 53 | GLY | CA | O1 | D | 1399 | 3.69 | van der Waals | D | No SSE | 53 | GLY | C | C1 | D | 1399 | 3.94 | van der Waals | D | No SSE | 53 | GLY | C | O1 | D | 1399 | 3.96 | van der Waals | D | No SSE | 53 | GLY | C | O2 | D | 1399 | 3.77 | van der Waals | D | No SSE | 53 | GLY | O | C1 | D | 1399 | 3.54 | van der Waals | D | No SSE | 53 | GLY | O | O1 | D | 1399 | 3.52 | H.Bond | D | No SSE | 53 | GLY | O | O2 | D | 1399 | 3.14 | H.Bond | D | No SSE | 55 | ASP | O | O2 | D | 1399 | 3.85 | H.Bond | D | No SSE | 55 | ASP | O | C3 | D | 1399 | 3.93 | van der Waals | D | No SSE | 55 | ASP | O | O3 | D | 1399 | 3.43 | H.Bond | D | No SSE | 376 | THR | O | C1 | D | 1399 | 3.25 | van der Waals | D | No SSE | 376 | THR | O | O1 | D | 1399 | 3.19 | H.Bond | D | No SSE | 376 | THR | O | O2 | D | 1399 | 2.99 | H.Bond | D | No SSE | 376 | THR | CB | O1 | D | 1399 | 3.82 | van der Waals | D | No SSE | 376 | THR | CB | O2 | D | 1399 | 3.77 | van der Waals | D | No SSE | 376 | THR | OG1 | C1 | D | 1399 | 3.24 | van der Waals | D | No SSE | 376 | THR | OG1 | O1 | D | 1399 | 2.61 | H.Bond | D | No SSE | 376 | THR | OG1 | O2 | D | 1399 | 3.2 | H.Bond | D | No SSE | 381 | HIS | CE1 | C1 | D | 1399 | 3.56 | van der Waals | D | No SSE | 381 | HIS | CE1 | O1 | D | 1399 | 3.62 | van der Waals | D | No SSE | 381 | HIS | CE1 | C2 | D | 1399 | 3.29 | van der Waals | D | Water | 2028 | HOH | O | C3 | D | 1399 | 2.8 | H.Bond | |
| 3 / E |
> Structure: SLLLLSLL
+1w
> Sequence: RFPVWCGDYTSH
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SIN /(1400) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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E | 25-28 S: 0 | 28 | ARG | CD | O3 | E | 1400 | 3.75 | van der Waals | E | 25-28 S: 0 | 28 | ARG | NH1 | C4 | E | 1400 | 3.63 | H.Bond | E | 25-28 S: 0 | 28 | ARG | NH1 | O3 | E | 1400 | 3.49 | H.Bond | E | 25-28 S: 0 | 28 | ARG | NH1 | O4 | E | 1400 | 3.08 | H.Bond | E | No SSE | 33 | PHE | CB | O3 | E | 1400 | 3.84 | van der Waals | E | No SSE | 33 | PHE | CG | O3 | E | 1400 | 3.91 | van der Waals | E | No SSE | 34 | PRO | CA | O3 | E | 1400 | 3.63 | van der Waals | E | No SSE | 34 | PRO | CB | O3 | E | 1400 | 3.99 | van der Waals | E | 45-50 S: -1 | 50 | VAL | O | O2 | E | 1400 | 3.65 | H.Bond | E | No SSE | 51 | TRP | CA | O2 | E | 1400 | 3.87 | van der Waals | E | No SSE | 51 | TRP | C | O2 | E | 1400 | 3.58 | van der Waals | E | No SSE | 51 | TRP | O | O2 | E | 1400 | 3.95 | H.Bond | E | No SSE | 52 | CYS | N | O2 | E | 1400 | 3.69 | H.Bond | E | No SSE | 53 | GLY | N | C1 | E | 1400 | 3.74 | H.Bond | E | No SSE | 53 | GLY | N | O2 | E | 1400 | 3.41 | H.Bond | E | No SSE | 53 | GLY | N | C2 | E | 1400 | 3.99 | H.Bond | E | No SSE | 53 | GLY | CA | C1 | E | 1400 | 3.94 | van der Waals | E | No SSE | 53 | GLY | CA | C2 | E | 1400 | 3.87 | van der Waals | E | No SSE | 53 | GLY | C | C1 | E | 1400 | 3.84 | van der Waals | E | No SSE | 53 | GLY | C | O1 | E | 1400 | 3.81 | van der Waals | E | No SSE | 53 | GLY | O | C1 | E | 1400 | 3.42 | van der Waals | E | No SSE | 53 | GLY | O | O1 | E | 1400 | 3.13 | H.Bond | E | No SSE | 53 | GLY | O | O2 | E | 1400 | 3.81 | H.Bond | E | No SSE | 55 | ASP | C | O4 | E | 1400 | 3.9 | van der Waals | E | No SSE | 55 | ASP | O | O1 | E | 1400 | 3.87 | H.Bond | E | No SSE | 55 | ASP | O | C2 | E | 1400 | 3.97 | van der Waals | E | No SSE | 55 | ASP | O | O4 | E | 1400 | 2.99 | H.Bond | E | No SSE | 55 | ASP | CB | O4 | E | 1400 | 3.58 | van der Waals | E | No SSE | 55 | ASP | CG | O4 | E | 1400 | 3.86 | van der Waals | E | No SSE | 55 | ASP | OD2 | O4 | E | 1400 | 3.48 | H.Bond | E | No SSE | 56 | TYR | CA | O1 | E | 1400 | 3.87 | van der Waals | E | No SSE | 376 | THR | C | O1 | E | 1400 | 3.93 | van der Waals | E | No SSE | 376 | THR | C | O2 | E | 1400 | 3.91 | van der Waals | E | No SSE | 376 | THR | O | C1 | E | 1400 | 3.19 | van der Waals | E | No SSE | 376 | THR | O | O1 | E | 1400 | 2.86 | H.Bond | E | No SSE | 376 | THR | O | O2 | E | 1400 | 2.94 | H.Bond | E | No SSE | 376 | THR | CB | O1 | E | 1400 | 3.68 | van der Waals | E | No SSE | 376 | THR | CB | O2 | E | 1400 | 3.91 | van der Waals | E | No SSE | 376 | THR | OG1 | C1 | E | 1400 | 3.2 | van der Waals | E | No SSE | 376 | THR | OG1 | O1 | E | 1400 | 3.17 | H.Bond | E | No SSE | 376 | THR | OG1 | O2 | E | 1400 | 2.77 | H.Bond | E | No SSE | 378 | SER | CB | O1 | E | 1400 | 3.93 | van der Waals | E | No SSE | 381 | HIS | CE1 | O2 | E | 1400 | 3.41 | van der Waals | E | No SSE | 381 | HIS | CE1 | C1 | E | 1400 | 3.69 | van der Waals | E | No SSE | 381 | HIS | CE1 | O2 | E | 1400 | 3.32 | van der Waals | E | No SSE | 381 | HIS | CE1 | C3 | E | 1400 | 3.45 | van der Waals | E | No SSE | 381 | HIS | NE2 | O2 | E | 1400 | 3.9 | H.Bond | E | Water | 2025 | HOH | O | C2 | E | 1400 | 2.98 | H.Bond | |
Nbr of Motifs per PDB entry | PDB Entry | Title | Determination Method | Resolution | R-Factor |
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1 | 2W8Q | Succinic Semialdehyde Dehydrogenase | X-RAY | 2.40 | 0.224
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| Motif No./Chain | Mode | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / A |
> Structure: HLHSHLLL
> Sequence: YFRERAVSF
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SIN /(3001) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | 149-171 H: 1 | 159 | TYR | CE2 | O1 | A | 3001 | 3.51 | van der Waals | A | No SSE | 206 | PHE | CE1 | C3 | A | 3001 | 3.64 | van der Waals | A | 208-222 H: 1 | 213 | ARG | NH1 | C2 | A | 3001 | 3.81 | H.Bond | A | 208-222 H: 1 | 213 | ARG | NH2 | C1 | A | 3001 | 3.86 | H.Bond | A | 208-222 H: 1 | 213 | ARG | NH2 | O1 | A | 3001 | 3.15 | H.Bond | A | 208-222 H: 1 | 213 | ARG | NH2 | C2 | A | 3001 | 3.64 | H.Bond | A | 302-307 S: 1 | 306 | GLU | OE1 | C4 | A | 3001 | 3.53 | van der Waals | A | 302-307 S: 1 | 306 | GLU | OE1 | O3 | A | 3001 | 3.69 | H.Bond | A | 320-334 H: 1 | 334 | ARG | CZ | O2 | A | 3001 | 3.74 | van der Waals | A | 320-334 H: 1 | 334 | ARG | NH1 | O2 | A | 3001 | 3.46 | H.Bond | A | 320-334 H: 1 | 334 | ARG | NH2 | C1 | A | 3001 | 3.9 | H.Bond | A | 320-334 H: 1 | 334 | ARG | NH2 | O2 | A | 3001 | 3.13 | H.Bond | A | No SSE | 340 | ALA | N | O3 | A | 3001 | 3.29 | H.Bond | A | No SSE | 340 | ALA | CA | O3 | A | 3001 | 3.82 | van der Waals | A | No SSE | 340 | ALA | CB | O3 | A | 3001 | 3.35 | van der Waals | A | No SSE | 341 | VAL | CG1 | C3 | A | 3001 | 3.98 | van der Waals | A | No SSE | 341 | VAL | CG1 | C4 | A | 3001 | 3.75 | van der Waals | A | No SSE | 341 | VAL | CG2 | O2 | A | 3001 | 3.8 | van der Waals | A | No SSE | 341 | VAL | CG2 | C3 | A | 3001 | 3.91 | van der Waals | A | No SSE | 498 | SER | OG | C1 | A | 3001 | 3.68 | van der Waals | A | No SSE | 498 | SER | OG | O1 | A | 3001 | 3.74 | H.Bond | A | No SSE | 498 | SER | OG | O2 | A | 3001 | 2.94 | H.Bond | A | No SSE | 504 | PHE | CE2 | O2 | A | 3001 | 3.99 | van der Waals | |
Nbr of Motifs per PDB entry | PDB Entry | Title | Determination Method | Resolution | R-Factor |
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2 | 4LH2 | DELTA (1)-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE | X-RAY | 1.67 | 0.165
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| Motif No./Chain | Mode | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / A |
> Structure: LHLLL
+2w
> Sequence: NFKCSTGSF
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SIN /(602) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | No SSE | 211 | ASN | ND2 | O4 | A | 602 | 3.3 | H.Bond | A | 212-226 H: 1 | 212 | PHE | CD1 | C3 | A | 602 | 3.98 | van der Waals | A | 212-226 H: 1 | 212 | PHE | CD1 | O4 | A | 602 | 3.84 | van der Waals | A | 212-226 H: 1 | 212 | PHE | CE1 | C3 | A | 602 | 3.22 | van der Waals | A | 212-226 H: 1 | 212 | PHE | CE1 | C4 | A | 602 | 3.54 | van der Waals | A | 212-226 H: 1 | 212 | PHE | CE1 | O4 | A | 602 | 3.18 | van der Waals | A | 212-226 H: 1 | 212 | PHE | CZ | C3 | A | 602 | 3.41 | van der Waals | A | No SSE | 347 | LYS | CA | O4 | A | 602 | 3.46 | van der Waals | A | No SSE | 347 | LYS | C | O3 | A | 602 | 3.86 | van der Waals | A | No SSE | 347 | LYS | C | O4 | A | 602 | 3.57 | van der Waals | A | No SSE | 347 | LYS | CB | C4 | A | 602 | 3.84 | van der Waals | A | No SSE | 347 | LYS | CB | O3 | A | 602 | 3.76 | van der Waals | A | No SSE | 347 | LYS | CB | O4 | A | 602 | 3.63 | van der Waals | A | No SSE | 348 | CYS | N | C4 | A | 602 | 3.45 | H.Bond | A | No SSE | 348 | CYS | N | O3 | A | 602 | 3.22 | H.Bond | A | No SSE | 348 | CYS | N | O4 | A | 602 | 2.81 | H.Bond | A | No SSE | 348 | CYS | CA | O3 | A | 602 | 3.63 | van der Waals | A | No SSE | 348 | CYS | CA | O4 | A | 602 | 3.72 | van der Waals | A | No SSE | 348 | CYS | C | O3 | A | 602 | 3.51 | van der Waals | A | No SSE | 348 | CYS | CB | O3 | A | 602 | 3.68 | van der Waals | A | No SSE | 348 | CYS | CB | O4 | A | 602 | 3.61 | van der Waals | A | No SSE | 348 | CYS | SG | O4 | A | 602 | 3.81 | | A | No SSE | 349 | SER | N | C4 | A | 602 | 3.77 | H.Bond | A | No SSE | 349 | SER | N | O3 | A | 602 | 2.7 | H.Bond | A | No SSE | 349 | SER | CA | O3 | A | 602 | 3.41 | van der Waals | A | No SSE | 349 | SER | CB | C1 | A | 602 | 3.91 | van der Waals | A | No SSE | 349 | SER | CB | O1 | A | 602 | 3.92 | van der Waals | A | No SSE | 349 | SER | CB | O3 | A | 602 | 2.94 | van der Waals | A | No SSE | 349 | SER | OG | C1 | A | 602 | 3.2 | van der Waals | A | No SSE | 349 | SER | OG | O1 | A | 602 | 2.82 | H.Bond | A | No SSE | 349 | SER | OG | O2 | A | 602 | 3.68 | H.Bond | A | No SSE | 349 | SER | OG | C2 | A | 602 | 3.91 | van der Waals | A | No SSE | 349 | SER | OG | C4 | A | 602 | 3.55 | van der Waals | A | No SSE | 349 | SER | OG | O3 | A | 602 | 2.56 | H.Bond | A | No SSE | 511 | THR | CA | O1 | A | 602 | 3.86 | van der Waals | A | No SSE | 511 | THR | C | O1 | A | 602 | 3.84 | van der Waals | A | No SSE | 511 | THR | CB | O1 | A | 602 | 3.98 | van der Waals | A | No SSE | 512 | GLY | N | C1 | A | 602 | 3.54 | H.Bond | A | No SSE | 512 | GLY | N | O1 | A | 602 | 2.92 | H.Bond | A | No SSE | 512 | GLY | N | O2 | A | 602 | 3.29 | H.Bond | A | No SSE | 512 | GLY | CA | O1 | A | 602 | 3.75 | van der Waals | A | No SSE | 512 | GLY | CA | O2 | A | 602 | 3.91 | van der Waals | A | No SSE | 512 | GLY | C | O2 | A | 602 | 3.82 | van der Waals | A | No SSE | 513 | SER | N | C1 | A | 602 | 3.71 | H.Bond | A | No SSE | 513 | SER | N | O2 | A | 602 | 2.83 | H.Bond | A | No SSE | 513 | SER | CA | O2 | A | 602 | 3.58 | van der Waals | A | No SSE | 513 | SER | CB | O2 | A | 602 | 3.19 | van der Waals | A | No SSE | 513 | SER | OG | C1 | A | 602 | 3.52 | van der Waals | A | No SSE | 513 | SER | OG | O2 | A | 602 | 2.69 | H.Bond | A | No SSE | 513 | SER | OG | C2 | A | 602 | 3.77 | van der Waals | A | No SSE | 520 | PHE | CD2 | O2 | A | 602 | 3.63 | van der Waals | A | No SSE | 520 | PHE | CE1 | C2 | A | 602 | 3.92 | van der Waals | A | No SSE | 520 | PHE | CE2 | C1 | A | 602 | 3.92 | van der Waals | A | No SSE | 520 | PHE | CE2 | O2 | A | 602 | 3.5 | van der Waals | A | No SSE | 520 | PHE | CE2 | C2 | A | 602 | 3.74 | van der Waals | A | No SSE | 520 | PHE | CZ | C2 | A | 602 | 3.66 | van der Waals | A | No SSE | 520 | PHE | CZ | O3 | A | 602 | 3.75 | van der Waals | A | Water | 1007 | HOH | O | O1 | A | 602 | 2.75 | H.Bond | A | Water | 1009 | HOH | O | O2 | A | 602 | 2.78 | H.Bond | |
| 2 / B |
> Structure: LHLLL
+2w
> Sequence: NFKCSTGSF
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SIN /(602) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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B | No SSE | 211 | ASN | ND2 | O4 | B | 602 | 3.39 | H.Bond | B | 212-226 H: 1 | 212 | PHE | CD1 | C3 | B | 602 | 3.95 | van der Waals | B | 212-226 H: 1 | 212 | PHE | CD1 | O4 | B | 602 | 3.74 | van der Waals | B | 212-226 H: 1 | 212 | PHE | CE1 | C3 | B | 602 | 3.25 | van der Waals | B | 212-226 H: 1 | 212 | PHE | CE1 | C4 | B | 602 | 3.51 | van der Waals | B | 212-226 H: 1 | 212 | PHE | CE1 | O4 | B | 602 | 3.13 | van der Waals | B | 212-226 H: 1 | 212 | PHE | CZ | C3 | B | 602 | 3.45 | van der Waals | B | No SSE | 347 | LYS | CA | O4 | B | 602 | 3.51 | van der Waals | B | No SSE | 347 | LYS | C | O3 | B | 602 | 3.81 | van der Waals | B | No SSE | 347 | LYS | C | O4 | B | 602 | 3.6 | van der Waals | B | No SSE | 347 | LYS | CB | C4 | B | 602 | 3.88 | van der Waals | B | No SSE | 347 | LYS | CB | O3 | B | 602 | 3.76 | van der Waals | B | No SSE | 347 | LYS | CB | O4 | B | 602 | 3.7 | van der Waals | B | No SSE | 348 | CYS | N | C4 | B | 602 | 3.44 | H.Bond | B | No SSE | 348 | CYS | N | O3 | B | 602 | 3.18 | H.Bond | B | No SSE | 348 | CYS | N | O4 | B | 602 | 2.83 | H.Bond | B | No SSE | 348 | CYS | CA | O3 | B | 602 | 3.58 | van der Waals | B | No SSE | 348 | CYS | CA | O4 | B | 602 | 3.71 | van der Waals | B | No SSE | 348 | CYS | C | O3 | B | 602 | 3.48 | van der Waals | B | No SSE | 348 | CYS | CB | C4 | B | 602 | 3.93 | van der Waals | B | No SSE | 348 | CYS | CB | O3 | B | 602 | 3.63 | van der Waals | B | No SSE | 348 | CYS | CB | O4 | B | 602 | 3.54 | van der Waals | B | No SSE | 348 | CYS | SG | O4 | B | 602 | 3.85 | | B | No SSE | 349 | SER | N | C4 | B | 602 | 3.74 | H.Bond | B | No SSE | 349 | SER | N | O3 | B | 602 | 2.64 | H.Bond | B | No SSE | 349 | SER | CA | O3 | B | 602 | 3.35 | van der Waals | B | No SSE | 349 | SER | CB | C1 | B | 602 | 3.85 | van der Waals | B | No SSE | 349 | SER | CB | O2 | B | 602 | 3.8 | van der Waals | B | No SSE | 349 | SER | CB | O3 | B | 602 | 2.9 | van der Waals | B | No SSE | 349 | SER | OG | C1 | B | 602 | 3.21 | van der Waals | B | No SSE | 349 | SER | OG | O1 | B | 602 | 3.73 | H.Bond | B | No SSE | 349 | SER | OG | O2 | B | 602 | 2.75 | H.Bond | B | No SSE | 349 | SER | OG | C2 | B | 602 | 3.91 | van der Waals | B | No SSE | 349 | SER | OG | C4 | B | 602 | 3.5 | van der Waals | B | No SSE | 349 | SER | OG | O3 | B | 602 | 2.51 | H.Bond | B | No SSE | 511 | THR | CA | O2 | B | 602 | 3.86 | van der Waals | B | No SSE | 511 | THR | C | O2 | B | 602 | 3.88 | van der Waals | B | No SSE | 512 | GLY | N | C1 | B | 602 | 3.58 | H.Bond | B | No SSE | 512 | GLY | N | O1 | B | 602 | 3.32 | H.Bond | B | No SSE | 512 | GLY | N | O2 | B | 602 | 2.97 | H.Bond | B | No SSE | 512 | GLY | CA | O1 | B | 602 | 3.93 | van der Waals | B | No SSE | 512 | GLY | CA | O2 | B | 602 | 3.8 | van der Waals | B | No SSE | 512 | GLY | C | O1 | B | 602 | 3.86 | van der Waals | B | No SSE | 513 | SER | N | C1 | B | 602 | 3.78 | H.Bond | B | No SSE | 513 | SER | N | O1 | B | 602 | 2.87 | H.Bond | B | No SSE | 513 | SER | CA | O1 | B | 602 | 3.62 | van der Waals | B | No SSE | 513 | SER | CB | O1 | B | 602 | 3.22 | van der Waals | B | No SSE | 513 | SER | OG | C1 | B | 602 | 3.51 | van der Waals | B | No SSE | 513 | SER | OG | O1 | B | 602 | 2.68 | H.Bond | B | No SSE | 513 | SER | OG | C2 | B | 602 | 3.8 | van der Waals | B | No SSE | 520 | PHE | CD2 | O1 | B | 602 | 3.62 | van der Waals | B | No SSE | 520 | PHE | CD2 | C2 | B | 602 | 3.97 | van der Waals | B | No SSE | 520 | PHE | CE1 | C2 | B | 602 | 3.81 | van der Waals | B | No SSE | 520 | PHE | CE2 | C1 | B | 602 | 3.86 | van der Waals | B | No SSE | 520 | PHE | CE2 | O1 | B | 602 | 3.5 | van der Waals | B | No SSE | 520 | PHE | CE2 | C2 | B | 602 | 3.63 | van der Waals | B | No SSE | 520 | PHE | CZ | C2 | B | 602 | 3.55 | van der Waals | B | No SSE | 520 | PHE | CZ | O3 | B | 602 | 3.71 | van der Waals | B | Water | 1013 | HOH | O | O2 | B | 602 | 2.71 | H.Bond | B | Water | 1014 | HOH | O | O1 | B | 602 | 2.82 | H.Bond | |
Nbr of Motifs per PDB entry | PDB Entry | Title | Determination Method | Resolution | R-Factor |
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2 | 2DJL | Succinate dehydrogenase | X-RAY | 1.38 | 0.166
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| Motif No./Chain | Mode | Bound Ligand /(Nbr. in PDB) | Show Details |
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| 1 / A |
> Structure: SLLLSL
+1w
> Sequence: KNMGLPNCPNN
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SIN /(1370) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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A | No SSE | 43 | LYS | CE | O3 | A | 1370 | 3.82 | van der Waals | A | No SSE | 43 | LYS | NZ | C4 | A | 1370 | 3.73 | H.Bond | A | No SSE | 43 | LYS | NZ | O3 | A | 1370 | 2.8 | H.Bond | A | 64-67 S: -1 | 67 | ASN | OD1 | O4 | A | 1370 | 3.99 | H.Bond | A | No SSE | 69 | MET | N | O4 | A | 1370 | 3.54 | H.Bond | A | No SSE | 69 | MET | CA | O4 | A | 1370 | 3.77 | van der Waals | A | No SSE | 69 | MET | C | O4 | A | 1370 | 3.73 | van der Waals | A | No SSE | 69 | MET | CB | C4 | A | 1370 | 3.58 | van der Waals | A | No SSE | 69 | MET | CB | O3 | A | 1370 | 3.44 | van der Waals | A | No SSE | 69 | MET | CB | O4 | A | 1370 | 3.57 | van der Waals | A | No SSE | 70 | GLY | N | C4 | A | 1370 | 3.63 | H.Bond | A | No SSE | 70 | GLY | N | O3 | A | 1370 | 3.63 | H.Bond | A | No SSE | 70 | GLY | N | O4 | A | 1370 | 2.83 | H.Bond | A | No SSE | 70 | GLY | CA | O4 | A | 1370 | 3.62 | van der Waals | A | No SSE | 70 | GLY | C | O3 | A | 1370 | 3.96 | van der Waals | A | No SSE | 71 | LEU | N | C4 | A | 1370 | 3.57 | H.Bond | A | No SSE | 71 | LEU | N | O3 | A | 1370 | 2.82 | H.Bond | A | No SSE | 71 | LEU | N | O4 | A | 1370 | 3.51 | H.Bond | A | No SSE | 71 | LEU | CA | O3 | A | 1370 | 3.26 | van der Waals | A | No SSE | 71 | LEU | CG | O3 | A | 1370 | 3.94 | van der Waals | A | No SSE | 71 | LEU | CD2 | O3 | A | 1370 | 3.66 | van der Waals | A | No SSE | 72 | PRO | CD | O3 | A | 1370 | 3.87 | van der Waals | A | 123-127 S: 1 | 127 | ASN | CG | O2 | A | 1370 | 3.83 | van der Waals | A | 123-127 S: 1 | 127 | ASN | OD1 | O2 | A | 1370 | 3.91 | H.Bond | A | 123-127 S: 1 | 127 | ASN | ND2 | O2 | A | 1370 | 2.91 | H.Bond | A | No SSE | 130 | CYS | N | O2 | A | 1370 | 3.97 | H.Bond | A | No SSE | 130 | CYS | CA | C1 | A | 1370 | 3.91 | van der Waals | A | No SSE | 130 | CYS | CA | O2 | A | 1370 | 3.46 | van der Waals | A | No SSE | 130 | CYS | CB | O2 | A | 1370 | 3.77 | van der Waals | A | No SSE | 130 | CYS | SG | C2 | A | 1370 | 3.6 | van der Waals | A | No SSE | 131 | PRO | CD | C1 | A | 1370 | 3.62 | van der Waals | A | No SSE | 131 | PRO | CD | O1 | A | 1370 | 3.46 | van der Waals | A | No SSE | 132 | ASN | CB | O4 | A | 1370 | 3.25 | van der Waals | A | No SSE | 132 | ASN | CG | O4 | A | 1370 | 3.56 | van der Waals | A | No SSE | 132 | ASN | ND2 | C3 | A | 1370 | 3.5 | H.Bond | A | No SSE | 132 | ASN | ND2 | C4 | A | 1370 | 3.64 | H.Bond | A | No SSE | 132 | ASN | ND2 | O4 | A | 1370 | 2.9 | H.Bond | A | No SSE | 194 | ASN | CG | C1 | A | 1370 | 3.99 | van der Waals | A | No SSE | 194 | ASN | CG | O1 | A | 1370 | 3.46 | van der Waals | A | No SSE | 194 | ASN | CG | O2 | A | 1370 | 3.62 | van der Waals | A | No SSE | 194 | ASN | OD1 | C1 | A | 1370 | 3.44 | van der Waals | A | No SSE | 194 | ASN | OD1 | O1 | A | 1370 | 2.6 | H.Bond | A | No SSE | 194 | ASN | OD1 | O2 | A | 1370 | 3.46 | H.Bond | A | No SSE | 194 | ASN | ND2 | C1 | A | 1370 | 3.71 | H.Bond | A | No SSE | 194 | ASN | ND2 | O1 | A | 1370 | 3.62 | H.Bond | A | No SSE | 194 | ASN | ND2 | O2 | A | 1370 | 2.96 | H.Bond | A | Water | 1426 | HOH | O | O1 | A | 1370 | 2.88 | H.Bond | |
| 2 / B |
> Structure: SLLLSL
+1w
> Sequence: KNMGLPNCPNN
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SIN /(2370) |
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Protein Chain | Prot SSE | Res Nbr | Res Name | RsAt.Name | LgAt.Name |
Lg Chain | Lg Nbr | Bnd Len | Bnd Type |
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B | No SSE | 43 | LYS | CE | O3 | B | 2370 | 3.85 | van der Waals | B | No SSE | 43 | LYS | NZ | C4 | B | 2370 | 3.77 | H.Bond | B | No SSE | 43 | LYS | NZ | O3 | B | 2370 | 2.82 | H.Bond | B | 64-67 S: -1 | 67 | ASN | OD1 | O4 | B | 2370 | 3.92 | H.Bond | B | No SSE | 69 | MET | N | O4 | B | 2370 | 3.42 | H.Bond | B | No SSE | 69 | MET | CA | O4 | B | 2370 | 3.7 | van der Waals | B | No SSE | 69 | MET | C | O4 | B | 2370 | 3.68 | van der Waals | B | No SSE | 69 | MET | CB | C4 | B | 2370 | 3.58 | van der Waals | B | No SSE | 69 | MET | CB | O3 | B | 2370 | 3.45 | van der Waals | B | No SSE | 69 | MET | CB | O4 | B | 2370 | 3.52 | van der Waals | B | No SSE | 70 | GLY | N | C4 | B | 2370 | 3.61 | H.Bond | B | No SSE | 70 | GLY | N | O3 | B | 2370 | 3.63 | H.Bond | B | No SSE | 70 | GLY | N | O4 | B | 2370 | 2.8 | H.Bond | B | No SSE | 70 | GLY | CA | O4 | B | 2370 | 3.64 | van der Waals | B | No SSE | 70 | GLY | C | O3 | B | 2370 | 3.97 | van der Waals | B | No SSE | 71 | LEU | N | C4 | B | 2370 | 3.57 | H.Bond | B | No SSE | 71 | LEU | N | O3 | B | 2370 | 2.82 | H.Bond | B | No SSE | 71 | LEU | N | O4 | B | 2370 | 3.54 | H.Bond | B | No SSE | 71 | LEU | CA | O3 | B | 2370 | 3.27 | van der Waals | B | No SSE | 71 | LEU | CG | O3 | B | 2370 | 3.93 | van der Waals | B | No SSE | 71 | LEU | CD2 | O3 | B | 2370 | 3.63 | van der Waals | B | No SSE | 72 | PRO | CD | O3 | B | 2370 | 3.96 | van der Waals | B | 123-127 S: 1 | 127 | ASN | CG | O2 | B | 2370 | 3.8 | van der Waals | B | 123-127 S: 1 | 127 | ASN | OD1 | O2 | B | 2370 | 3.85 | H.Bond | B | 123-127 S: 1 | 127 | ASN | ND2 | O2 | B | 2370 | 2.89 | H.Bond | B | No SSE | 130 | CYS | N | O2 | B | 2370 | 3.94 | H.Bond | B | No SSE | 130 | CYS | CA | C1 | B | 2370 | 3.94 | van der Waals | B | No SSE | 130 | CYS | CA | O2 | B | 2370 | 3.45 | van der Waals | B | No SSE | 130 | CYS | CB | O2 | B | 2370 | 3.76 | van der Waals | B | No SSE | 130 | CYS | SG | C2 | B | 2370 | 3.68 | van der Waals | B | No SSE | 131 | PRO | CD | C1 | B | 2370 | 3.71 | van der Waals | B | No SSE | 131 | PRO | CD | O1 | B | 2370 | 3.53 | van der Waals | B | No SSE | 132 | ASN | CB | O4 | B | 2370 | 3.27 | van der Waals | B | No SSE | 132 | ASN | CG | O4 | B | 2370 | 3.58 | van der Waals | B | No SSE | 132 | ASN | ND2 | C3 | B | 2370 | 3.54 | H.Bond | B | No SSE | 132 | ASN | ND2 | C4 | B | 2370 | 3.66 | H.Bond | B | No SSE | 132 | ASN | ND2 | O4 | B | 2370 | 2.91 | H.Bond | B | No SSE | 194 | ASN | CG | O1 | B | 2370 | 3.52 | van der Waals | B | No SSE | 194 | ASN | CG | O2 | B | 2370 | 3.59 | van der Waals | B | No SSE | 194 | ASN | OD1 | C1 | B | 2370 | 3.46 | van der Waals | B | No SSE | 194 | ASN | OD1 | O1 | B | 2370 | 2.65 | H.Bond | B | No SSE | 194 | ASN | OD1 | O2 | B | 2370 | 3.42 | H.Bond | B | No SSE | 194 | ASN | ND2 | C1 | B | 2370 | 3.74 | H.Bond | B | No SSE | 194 | ASN | ND2 | O1 | B | 2370 | 3.68 | H.Bond | B | No SSE | 194 | ASN | ND2 | O2 | B | 2370 | 2.94 | H.Bond | B | Water | 2462 | HOH | O | O1 | B | 2370 | 2.92 | H.Bond | |