Viruses: a system for integrating data on viruses

Viruses β-v.4.0 - July. 2021, © Abdelkrim Rachedi at the Dept. of Biology, Saida University, Algeria, v.1 - March 2020. E-mail: rachedi@bioinformaticstools.org -
Disclaimer: The Viruses Database system offers data as they are from sources^() used in the data integration. The data are by no mean complete about all types viruses, however, the database is regularly updatad and the tool system is continuously further developed. ^()Primarily the COVID-19 Genomics UK Consortium (COG-UK), NCBI/Genbank, EMBL genomics data & PDB structural data.
References: Mutations in the SARS-CoV-2 complete genome sequences from strains isolated in Blida province, Algeria. Abdelkrim Rachedi, JNBGP 2020: Journees Nationales virtuelles de bioinformatique: Genomique et proteomique - USDB, October 09-10, 2020 - Refer to DOI: 10.13140/RG.2.2.20838.45123 The Keynote Conference presentation (1h:30Min) is available here: https://www.youtube.com/watch?v=JaIU6ufeI4g&t=1690s The Viruses tool, created by the DIRC Data Integration Module, is based on an improved version of the algorithm reported in the following research paper: Abdelkrim Rachedi et al., GABAagent: a system for integrating data on GABA receptors.* Bioinformatics. 2000 Apr;16(4):301-12.*

SVGM-Explorer: New Variants, Genomes & Mutations of the SARS-CoV-2 Virus.

SARS-CoV-2 New Variants, Alpha (B.1.1.7) & Delta (B.1.617.2), counts in Algeria:

Per Month of June 2021.

Per Week development - May 2021.

03- May 2021 - 1st time Delta variant B.1.617.2 detected by the Institut Pasteur d'Algerie.

Articles in the JSBB Journal:

→ Possible molecular basis behind the late surge of COVID-19 in Algeria.
الأسس الجزيئية المحتملة وراء الإرتفاع الأخير لحالات كوفيد-19 في الجزائر

→ Towards a molecular based explanation of the high transmissibility
of the new variants of the corona-virus; VUI-202012/01 & 501Y.V2 and the rise of
COVID-19 cases in England/Europe and South Africa.

Explore Algerian SARS-CoV-2 Genomes:

Genome: EPI_ISL_420037 Male - Boufarik town, Blida province.

Genome: EPI_ISL_418241 Female - Boufarik town, Blida province.

Genome: EPI_ISL_418242 Male - Blida city, Blida province.

Explore All available SARS-CoV-2 Genomes:

SARS-CoV-2 Genomes & Genomic data

SVGM-Explorer: SARS-CoV-2 New Variants, Genomes & Mutations. SARS-CoV-2 diagram (created with biorender.com)

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Direct access:

Find Complete Genome of the new Coronavirus 2019-nCoV^(*)
(Reference Genome Wuhan-Hu-1):

Find 2019-nCoV Sequences:

Genbank Sequences

(*) 2019-nCoV is same SARS-CoV-2 (Severe acute respiratory syndrome coronavirus 2)